BS25165.complete Sequence
1043 bp assembled on 2011-06-27
GenBank Submission: KX803350
> BS25165.complete
GAAGTTATCAGTCGACATGGGTTTCATCTTCGGTTGGCTGTCGACCGAGC
ACTATGTGCGCGACATCTTCCTCATGACTTCAGTGGCCGCCATAGTGGCC
ACCCTGATGAGCATTCGGTTCTATCTGCGCATCACGGCGGGACGATGTTT
CACCGAGACAAAGATGGAGGGCAAGACAGTCATTATCACAGGCGCCAACA
GCGGAATTGGCAAGGAGACGGCCAAGGATCTGGCTGGACGTGGAGCCCGC
ATCATCATGGCCTGCAGGAACCTGGAGACTGCCAATGCAGTGAAGGATGA
GATCGTCAAGGAGACGAAGAACAACAAGATCCTAGTCAAGAAACTGGATC
TGGGCTCCCAGAAGTCCGTCCGTGAGTTCGCCGCTGACATTGTGAAGACC
GAGCCCAAGATCGATGTGCTTATCCACAATGCCGGCATGGCTCTGGCCTT
CCGCGGACAGACGAGTGAGGATGGCGTGGAGCTGACCATGGCCACCAATC
ACTATGGACCCTTCCTGCTGACGCATCTGCTCATCGATGTACTAAAGAAG
AGCGCGCCGGCTCGCATAGTCATCGTAGCCTCGGAGCTGTACCGCCTGTC
GTCGGTTAACCTGGCCAAGCTCAATCCCATCGGCACTTTCCCGGCTGCCT
ACTTATACTATGTGTCCAAGTTTGCGAACATCTACTTTGCCCGGGAGCTG
GCCAAGCGGCTGGAGGGCACCAAGGTTACAGTGAATTTCCTGCATCCCGG
CATGATCGACTCGGGCATTTGGCGTAACGTTCCCTTCCCCCTCAACTTGC
CCATGATGGCCATCACCAAGGGATTCTTCAAGACCACCAAGGCCGGCGCC
CAGACCACTATCTATTTGGCCACATCCAATGAGGTGGCCAATGTGTCTGG
AAAGTACTTCATGGACTGCAAGGAGGCCACCCTTAATGCTGCTGCCCTCG
ATGAGGAGAAGGGTCTCAAGATCTGGGAGGAGTCCGTGAAGATTGTCAAG
CTTACGCCCCAGGATCCCAAAATCTAGAAGCTTTCTAGACCAT
BS25165.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:41:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7675-RD | 1011 | CG7675-PD | 1..1011 | 17..1027 | 5055 | 100 | Plus |
| CG7675-RB | 1011 | CG7675-PB | 1..1011 | 17..1027 | 5055 | 100 | Plus |
| CG7675-RE | 864 | CG7675-PE | 1..864 | 164..1027 | 4320 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7675-RD | 1224 | CG7675-RD | 101..1112 | 17..1028 | 5060 | 100 | Plus |
| CG7675-RB | 1272 | CG7675-RB | 149..1160 | 17..1028 | 5060 | 100 | Plus |
| CG7675-RC | 1082 | CG7675-RC | 98..970 | 156..1028 | 4365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18378236..18378968 | 1028..296 | 3665 | 100 | Minus |
| 3R | 32079331 | 3R | 18379226..18379366 | 296..156 | 705 | 100 | Minus |
| 3R | 32079331 | 3R | 18380213..18380353 | 157..17 | 705 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:41:21 has no hits.
BS25165.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:24:35 Download gff for
BS25165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7675-RB | 146..1156 | 17..1027 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:41:59 Download gff for
BS25165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7675-RB | 146..1156 | 17..1027 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:33 Download gff for
BS25165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7675-RB | 149..1159 | 17..1027 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:33 Download gff for
BS25165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18379226..18379364 | 158..296 | 100 | <- | Minus |
| 3R | 18380213..18380353 | 17..157 | 100 | | Minus |
| 3R | 18378237..18378967 | 297..1027 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:41:59 Download gff for
BS25165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14203959..14204689 | 297..1027 | 100 | <- | Minus |
| arm_3R | 14204948..14205086 | 158..296 | 100 | <- | Minus |
| arm_3R | 14205935..14206075 | 17..157 | 100 | | Minus |
BS25165.pep Sequence
Translation from 16 to 1026
> BS25165.pep
MGFIFGWLSTEHYVRDIFLMTSVAAIVATLMSIRFYLRITAGRCFTETKM
EGKTVIITGANSGIGKETAKDLAGRGARIIMACRNLETANAVKDEIVKET
KNNKILVKKLDLGSQKSVREFAADIVKTEPKIDVLIHNAGMALAFRGQTS
EDGVELTMATNHYGPFLLTHLLIDVLKKSAPARIVIVASELYRLSSVNLA
KLNPIGTFPAAYLYYVSKFANIYFARELAKRLEGTKVTVNFLHPGMIDSG
IWRNVPFPLNLPMMAITKGFFKTTKAGAQTTIYLATSNEVANVSGKYFMD
CKEATLNAAALDEEKGLKIWEESVKIVKLTPQDPKI*
BS25165.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:40:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7675-PD | 336 | CG7675-PD | 1..336 | 1..336 | 1700 | 100 | Plus |
| CG7675-PB | 336 | CG7675-PB | 1..336 | 1..336 | 1700 | 100 | Plus |
| CG7675-PE | 287 | CG7675-PE | 1..287 | 50..336 | 1448 | 100 | Plus |
| CG7675-PC | 287 | CG7675-PC | 1..287 | 50..336 | 1448 | 100 | Plus |
| CG7675-PA | 287 | CG7675-PA | 1..287 | 50..336 | 1448 | 100 | Plus |
