BS25169.complete Sequence
1064 bp assembled on 2012-04-25
GenBank Submission: KX802012
> BS25169.complete
GAAGTTATCAGTCGACATGTCCTCGACCGCCGGAAAGCGCAAGGAGATCT
ACAAATATCTCGCGCCATGGCCACTGTACTCCATGAACTGGAGTGTAAGG
CCGGACAAGCGATTCCGGCTCGCACTGGGCAGCTTCATCGAGGAGTACAA
CAACAAGGTACAGATCATCAGCCTGGACGAGGACACCAGCGAATTTAGTG
CTAAGAGCACCTTTGATCATCCATATCCGACAACCAAGATCATGTGGATC
CCGGACTCCAAGGGTGTCTATCCGGATCTGTTGGCCACCAGTGGCGACTA
CTTGCGGGTGTGGCGTGCCGGGGAACCGGACACGCGGCTCGAGTGCGTAC
TGAATAACAACAAGAACAGCGACTTTTGCGCTCCCCTCACTTCGTTTGAT
TGGAACGAGGTGGATCCCAATCTGGTGGGAACCTCATCGATAGACACAAC
CTGCACTATCTGGGGACTGGAGACCGGACAGCCGCACGCTCGCGTCTATG
TGGCAGGACACGTGAAGACGCAATTGATTGCCCATGACAAGGAAGTATAC
GACATTGCTTTTTCGCGGGCCGGCGGCGGTCGGGACATGTTTGCCTCGGT
GGGAGCGGACGGGTCGGTGCGCATGTTTGATCTGCGGCACTTGGAGCACT
CGACCATTATATATGAGGATCCTGCTCATACGGCGCTGCTGCGCTTGGCC
TGGAACAAACAGGACCCGAACTACTTAGCCACCGTTGCCATGGACTCGTG
CGAAGTAATAATTTTAGATGTTCGTGTTCCTTGTACACCCGTTGCAAGAC
TGAGCAATCACAGAGCGTGCGTCAACGGTATTGCGTGGGCGCCGCATAGT
TCCTGTCACATCTGCACTGCCGGTGATGATCACCAAGCACTGATCTGGGA
TATACAACAAATGCCACGTGCAATCGAGGATCCAATTTTAGCCTATACAG
CTGCCGAGGGCGAAGTCAATCAGATTCAGTGGGGTGCCACACAGCCCGAC
TGGATAGCCATTTGCTATAACAAAGCGTGCGAGATCCTGCGGGTCTAAAA
GCTTTCTAGACCAT
BS25169.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:58:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wap-RD | 1032 | CG14614-PD | 1..1032 | 17..1048 | 5160 | 100 | Plus |
| wap-RC | 1032 | CG14614-PC | 1..1032 | 17..1048 | 5160 | 100 | Plus |
| wap-RB | 1032 | CG14614-PB | 1..1032 | 17..1048 | 5160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:58:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wap-RD | 3366 | CG14614-RD | 550..1581 | 17..1048 | 5160 | 100 | Plus |
| wap-RC | 3400 | CG14614-RC | 695..1726 | 17..1048 | 5160 | 100 | Plus |
| wap-RB | 3283 | CG14614-RB | 578..1609 | 17..1048 | 5160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:58:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 22453730..22454192 | 668..206 | 2315 | 100 | Minus |
| X | 23542271 | X | 22453230..22453430 | 1048..848 | 1005 | 100 | Minus |
| X | 23542271 | X | 22454394..22454584 | 207..17 | 955 | 100 | Minus |
| X | 23542271 | X | 22453491..22453674 | 849..666 | 920 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:58:12 has no hits.
BS25169.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 15:16:56 Download gff for
BS25169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14614-RB | 584..1613 | 17..1046 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:10 Download gff for
BS25169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14614-RC | 701..1730 | 17..1046 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:54:34 Download gff for
BS25169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wap-RB | 578..1607 | 17..1046 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:54:34 Download gff for
BS25169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 22453232..22453428 | 850..1046 | 100 | <- | Minus |
| X | 22453491..22453672 | 668..849 | 100 | <- | Minus |
| X | 22453731..22454190 | 208..667 | 100 | <- | Minus |
| X | 22454394..22454584 | 17..207 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:10 Download gff for
BS25169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21855068..21855264 | 850..1046 | 100 | <- | Minus |
| arm_X | 21855327..21855508 | 668..849 | 100 | <- | Minus |
| arm_X | 21855567..21856026 | 208..667 | 100 | <- | Minus |
| arm_X | 21856230..21856420 | 17..207 | 100 | | Minus |
BS25169.pep Sequence
Translation from 16 to 1047
> BS25169.pep
MSSTAGKRKEIYKYLAPWPLYSMNWSVRPDKRFRLALGSFIEEYNNKVQI
ISLDEDTSEFSAKSTFDHPYPTTKIMWIPDSKGVYPDLLATSGDYLRVWR
AGEPDTRLECVLNNNKNSDFCAPLTSFDWNEVDPNLVGTSSIDTTCTIWG
LETGQPHARVYVAGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGS
VRMFDLRHLEHSTIIYEDPAHTALLRLAWNKQDPNYLATVAMDSCEVIIL
DVRVPCTPVARLSNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP
RAIEDPILAYTAAEGEVNQIQWGATQPDWIAICYNKACEILRV*
BS25169.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:22:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wap-PD | 343 | CG14614-PD | 1..343 | 1..343 | 1861 | 100 | Plus |
| wap-PC | 343 | CG14614-PC | 1..343 | 1..343 | 1861 | 100 | Plus |
| wap-PB | 343 | CG14614-PB | 1..343 | 1..343 | 1861 | 100 | Plus |
| wap-PA | 343 | CG14614-PA | 1..343 | 1..343 | 1861 | 100 | Plus |
