BS25219.complete Sequence
1085 bp assembled on 2011-06-29
GenBank Submission: KX803181
> BS25219.complete
GAAGTTATCAGTCGACATGCAGTTTGTGGCCAGTGAGCACCCGCACCGAC
GTCTAAATCCGTTGAACGGCCAATGGGTCCTAGTGTGCCCACATCGCACC
CAACGCCCTTGGTCGGGTCAGCAGGAGAAGGCGCAGAAGAACGAGCTGCC
CGAATTCGATCCCACCAATCCTCTGTGCCCTGGCGTCACCAGACCCAATG
GAATCCAAACTCCGGAATATGAGAGCACCTATGTGTTTGAGAACGACTTC
CCGGCCCTGGTGGAGGTGGTGCCCGTTCCGCCCAACAACGATGATCCACT
GTTCCAGATAGCTCCCGCCCGTGGCAACTGCCGAGTGATGTGCTTCCATC
CCAAATCGAATCTGACTTTGCCCACGATGAGTGCAGCGGAAATCGTCGTT
GTTATCGACGAGTGGATCAGCCAGTTCAACGAGCTTAGCGCCAAGTACGC
GTGGGTGCAGATATTCGAGAACAAGGGAGCCGCCATGGGGTGTTCCAATC
CCCATCCGCACTGCCAGATCTGGTCATGCTCGTTTCTGCCGACGGAACCG
CAACTGAAGCAGGAGCGTCTGCGTGCCTACTACGCCACCAACGAGCGGCC
CATGCTGGCCGACTATGTGGAGCGTGAGCTGCAGCGCCAGGAGCGGATTG
TCATTGAGAATCGCGACTGGTTGGTGGTGGTGCCCTTCTGGGCCACTTGG
CCCTTCGAAACCATGCTCATCTCACGCAACAACAATAAGCGGATCAATGA
TCTTACCGCAGAACAGCGATACAACTTGGCGCTGACCATAAAGGAGCTGA
CCACCAAGTATGACAATCTGTTCCAGTGTTCATTCCCCTACTCGATGGGT
TGGCATGGAGCACCGACTGGGCCGGAGCATGCCCACGCATCCAGTGCTCA
TTGGACCCTGCACGCCATCTACTATCCGCCGCTGCTTCGTTCTGCCTCCG
TGCGCAAGTTCATGGTGGGATTTGAGCTGCTGGCCATGGCCCAGCGGGAT
CTGACTCCCGAACAGGCAGCCCAAAGGTTGCGGGAGGTCGATGGAAAGTG
TCATTATCTAGAGAAGTGAAAGCTTTCTAGACCAT
BS25219.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:41:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galt-RB | 1053 | CG9232-PB | 1..1053 | 17..1069 | 5265 | 100 | Plus |
| Galt-RA | 1053 | CG9232-PA | 1..1053 | 17..1069 | 5265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:41:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galt-RB | 1459 | CG9232-RB | 345..1397 | 17..1069 | 5265 | 100 | Plus |
| Galt-RA | 1484 | CG9232-RA | 345..1397 | 17..1069 | 5265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:41:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6666351..6667008 | 1069..412 | 3290 | 100 | Minus |
| 2L | 23513712 | 2L | 6667084..6667291 | 413..206 | 1040 | 100 | Minus |
| 2L | 23513712 | 2L | 6667361..6667531 | 205..35 | 855 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:41:10 has no hits.
BS25219.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-29 16:03:50 Download gff for
BS25219.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9232-RA | 343..1394 | 17..1068 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:07:07 Download gff for
BS25219.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galt-RA | 345..1396 | 17..1068 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:25:04 Download gff for
BS25219.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galt-RA | 345..1396 | 17..1068 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:25:04 Download gff for
BS25219.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6666352..6667008 | 412..1068 | 100 | <- | Minus |
| 2L | 6667086..6667291 | 206..411 | 100 | <- | Minus |
| 2L | 6667361..6667530 | 36..205 | 100 | <- | Minus |
| 2L | 6667671..6667689 | 17..35 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:07:07 Download gff for
BS25219.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6666352..6667008 | 412..1068 | 100 | <- | Minus |
| arm_2L | 6667086..6667291 | 206..411 | 100 | <- | Minus |
| arm_2L | 6667361..6667530 | 36..205 | 100 | <- | Minus |
| arm_2L | 6667671..6667689 | 17..35 | 100 | | Minus |
BS25219.pep Sequence
Translation from 16 to 1068
> BS25219.pep
MQFVASEHPHRRLNPLNGQWVLVCPHRTQRPWSGQQEKAQKNELPEFDPT
NPLCPGVTRPNGIQTPEYESTYVFENDFPALVEVVPVPPNNDDPLFQIAP
ARGNCRVMCFHPKSNLTLPTMSAAEIVVVIDEWISQFNELSAKYAWVQIF
ENKGAAMGCSNPHPHCQIWSCSFLPTEPQLKQERLRAYYATNERPMLADY
VERELQRQERIVIENRDWLVVVPFWATWPFETMLISRNNNKRINDLTAEQ
RYNLALTIKELTTKYDNLFQCSFPYSMGWHGAPTGPEHAHASSAHWTLHA
IYYPPLLRSASVRKFMVGFELLAMAQRDLTPEQAAQRLREVDGKCHYLEK
*
BS25219.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:55:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galt-PB | 350 | CG9232-PB | 1..350 | 1..350 | 1918 | 100 | Plus |
| Galt-PA | 350 | CG9232-PA | 1..350 | 1..350 | 1918 | 100 | Plus |
