BS25257.complete Sequence
479 bp assembled on 2011-06-27
GenBank Submission: KX802223
> BS25257.complete
GAAGTTATCAGTCGACATGGCTTCTGGTGTAACTGTGTCTGATGTCTGCA
AGACTACATACGAGGAAATAAAGAAGGACAAAAAGCATCGCTATGTCATC
TTTTACATTCGCGATGAAAAGCAGATTGATGTGGAGACTGTGGCAGATCG
CAACGCCGAGTACGACCAGTTTCTAGAAGATATCCAGAAATGCGGACCTG
GAGAGTGCCGGTACGGACTGTTCGATTTCGAGTACATGCACCAGTGTCAA
GGCACCTCTGAGAGTTCAAAGAAGCAAAAGCTGTTCCTTATGTCGTGGTG
TCCCGATACTGCCAAGGTCAAGAAGAAGATGTTGTACTCCAGCTCCTTCG
ATGCTCTCAAGAAGTCGCTCGTGGGCGTCCAAAAGTATATACAAGCCACT
GATCTTTCCGAAGCCTCCCGGGAAGCCGTCGAGGAGAAACTCCGGGCCAC
CGACCGCCAATAAAAGCTTTCTAGACCAT
BS25257.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:57:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tsr-RA | 447 | CG4254-PA | 1..447 | 17..463 | 2235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:57:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tsr-RA | 735 | CG4254-RA | 138..585 | 17..464 | 2240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:57:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24044989..24045183 | 213..19 | 975 | 100 | Minus |
| 2R | 25286936 | 2R | 24044603..24044752 | 464..315 | 750 | 100 | Minus |
| 2R | 25286936 | 2R | 24044812..24044920 | 318..210 | 545 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:57:54 has no hits.
BS25257.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-27 10:25:23 Download gff for
BS25257.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsr-RA | 169..613 | 17..461 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:48:50 Download gff for
BS25257.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsr-RA | 138..582 | 17..461 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:59 Download gff for
BS25257.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsr-RA | 138..582 | 17..461 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:59 Download gff for
BS25257.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24044992..24045184 | 17..210 | 99 | | Minus |
| 2R | 24044606..24044750 | 317..461 | 100 | <- | Minus |
| 2R | 24044814..24044919 | 211..316 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:48:50 Download gff for
BS25257.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19932129..19932273 | 317..461 | 100 | <- | Minus |
| arm_2R | 19932337..19932442 | 211..316 | 100 | <- | Minus |
| arm_2R | 19932515..19932707 | 17..210 | 99 | | Minus |
BS25257.pep Sequence
Translation from 16 to 462
> BS25257.pep
MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYD
QFLEDIQKCGPGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAK
VKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASREAVEEKLRATDRQ*
BS25257.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:47:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tsr-PA | 148 | CG4254-PA | 1..148 | 1..148 | 771 | 100 | Plus |
| CG6873-PA | 148 | CG6873-PA | 1..148 | 1..148 | 434 | 52.7 | Plus |
