BS25301.complete Sequence
716 bp assembled on 2011-07-25
GenBank Submission: KX806523
> BS25301.complete
GAAGTTATCAGTCGACATGGACAAGGATGCGTTTACATTACAGGCCATAC
GGCAGGACCTTATCGATAACAATCTGCAGGCTAAGGCAATAATACACGAC
ATCCTGAACAGCCGCACCTCCATCGCCGAACTCGAGGAGCTGAACGAAGC
GGGCCGCTCCAAACTGTCTGCTATCCGCAAAAGCATCGAGCGGCTGGACG
ACTGGGCGCGGGACACGGCAGACTCTGCGCTGGCCAATGAAGTGGACGAC
CACCGTGATCAGTTCTCCAAAACGCTGCAGGCGTTCCGAAAAGCAAACGT
GTCCACGATGCTGGAGATCGAGAAGGCCAATCGGGAGGAGTTAATGGCCA
TTACCGGCGAGAGTGAGCTACGCCAACGAACCACAACACGGGCGCGGCAC
AACCAGGGCAGTCTGGTTTCGCAGGAGAACGACGTGACCGAGAAGATGCT
GGCTATATCGCGGCACCTCTCGGAGACCACCCAGAAGAGCGCCATCACCC
TGGAAACGCTCGTGGCCTCGTCGCAAAATGTGGAGGCCACCAGCGACGAA
CTGCACCACACGGCCGGCAGCATTAGCATGTCCGGCAAGCTGCTCAAAAA
GTACGGACGACGCGAGTGCACTGACAAAATGCTGCTCTTCTTCGCCTTCT
CCTTGTTCCTCGCCTGTGTCTTTTACATCGTCCAAAAGCGACTCTTCTAA
AAGCTTTCTAGACCAT
BS25301.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:08:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2023-RA | 684 | CG2023-PA | 1..684 | 17..700 | 3420 | 100 | Plus |
| CG2023-RB | 684 | CG2023-PB | 1..684 | 17..700 | 3420 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:08:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2023-RA | 2426 | CG2023-RA | 61..747 | 14..700 | 3435 | 100 | Plus |
| CG2023-RB | 953 | CG2023-RB | 89..775 | 14..700 | 3435 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:08:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5823705..5824307 | 700..98 | 3015 | 100 | Minus |
| 3R | 32079331 | 3R | 5824360..5824444 | 98..14 | 425 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:08:50 has no hits.
BS25301.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-25 14:58:02 Download gff for
BS25301.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2023-RA | 64..745 | 17..698 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:48:20 Download gff for
BS25301.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2023-RA | 64..745 | 17..698 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:52:37 Download gff for
BS25301.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2023-RB | 92..773 | 17..698 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:52:37 Download gff for
BS25301.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5823707..5824307 | 98..698 | 100 | <- | Minus |
| 3R | 5824361..5824441 | 17..97 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:48:20 Download gff for
BS25301.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1649429..1650029 | 98..698 | 100 | <- | Minus |
| arm_3R | 1650083..1650163 | 17..97 | 100 | | Minus |
BS25301.pep Sequence
Translation from 16 to 699
> BS25301.pep
MDKDAFTLQAIRQDLIDNNLQAKAIIHDILNSRTSIAELEELNEAGRSKL
SAIRKSIERLDDWARDTADSALANEVDDHRDQFSKTLQAFRKANVSTMLE
IEKANREELMAITGESELRQRTTTRARHNQGSLVSQENDVTEKMLAISRH
LSETTQKSAITLETLVASSQNVEATSDELHHTAGSISMSGKLLKKYGRRE
CTDKMLLFFAFSLFLACVFYIVQKRLF*
BS25301.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:04:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2023-PA | 227 | CG2023-PA | 1..227 | 1..227 | 1119 | 100 | Plus |
| CG2023-PB | 227 | CG2023-PB | 1..227 | 1..227 | 1119 | 100 | Plus |
