BS25304.complete Sequence
1241 bp assembled on 2011-07-25
GenBank Submission: KX805211
> BS25304.complete
GAAGTTATCAGTCGACATGCCACTGCTGGAGGCACCTGCGGACTACCTGG
AGTCCTCTCCGGATCAATCGCTTCAGGCGGAACTGCCCATCCTTCTGGCA
CCGCCAGGACCGGCCGCCTTGGCCCAGGTCCGGATGCCTCCGCCCGAGGT
GCGGCTCAATCAGCAGAATCCCGCACAGCAGCAGCAGCAGCGGATGCAGT
TCAACCGCCGCCAACTGGGTCGCCGGAACTCCTTCGATCGGGATGTGGCC
ATTGCCGAGGAGGAACAGCACCTTCCGGCCTTCGTCCACCTGCTGCCCGT
GGTGCTACCCCAACAGGGCCCGGAACCGACACTGGACGAGCTACTGCGCC
GAGTGACGCAACGCACGGATCTGGAGGCGGTGGAGCAAGTGCGTCTGCGC
GTGATCTCTTACACAGTCAGCCTGTCCCGCCTGTCGCTCTTCCTGCCGCG
CCTCCAATCCCTCGACCTGAGTGGCAGTGTGCTGAGCTCCCTGCGCGACC
TGGGCTATGGACTCCTCCAGCTAACCCGGTTGGACATCAGCAACTGCGGC
CTGAATAGCTTCGACGGCACCAGTGGACTGCCGGCCATCCGTGTGCTCAT
CGCCGATGGAAACATGATCCAGCGGGTTGATCCGCTGGCCGAACTGGTCC
ACCTGCGCGTTCTCAAGGCAAGGAACAACCGGATCAGTGAGCTGGGCCTG
CTCTCCTTCTTGGGAATGTGCCCGCAGCTGCAGGAGGTGGAGTTGCAGGG
CAATCCCGTGTGTCGTTTACCGCTCTACCGCTCGCTCCTGGCGCGCAGTG
TGCCCACGTTGCAACTGTTGGATGGACGGGTGTTGAACGGTGAACCTGCT
CCGGTGGAGATGGAGGAGGCCACATCCCCGGCATCAAGTGATCTGGAGTC
TGGCTCCGAGACGACTGCACAACGGCCGAACACGGCGCCTGCTCCGGAAC
CCGTTCCTATCGCCTTGAATGCTGCCATCCGGCGCCAAGTGTCGGCCAGC
TCTGGCTCCACTCCAGTGGCCGGATCGGTTTTGAGCCTGGTGCGCCAGCG
GCGAAGGCGCAGTGGCCACGCCTGGGTCAGTTCCTCCTCCTCCAGCGGAT
CGTCTTCCGCCTCCTCTGCCCGATCCACGCGGGCGCCATCAATGAGCTCC
TGCTCCTCCAACAGCAGCCTCGACGTCCAATCATCGTCCCATTATGTCTT
CAGCACACAGTCAACGCTGGACTAGAAGCTTTCTAGACCAT
BS25304.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:19:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14185-RA | 1209 | CG14185-PA | 1..1209 | 17..1225 | 6045 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:19:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14185-RA | 1397 | CG14185-RA | 28..1237 | 17..1226 | 6050 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:19:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20106517..20107397 | 346..1226 | 4405 | 100 | Plus |
| 3L | 28110227 | 3L | 20106121..20106450 | 17..346 | 1650 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:19:08 has no hits.
BS25304.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-25 15:14:50 Download gff for
BS25304.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14185-RA | 28..1236 | 17..1225 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:54:10 Download gff for
BS25304.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14185-RA | 28..1236 | 17..1225 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:57:31 Download gff for
BS25304.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14185-RA | 28..1236 | 17..1225 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:57:31 Download gff for
BS25304.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20106121..20106450 | 17..346 | 100 | -> | Plus |
| 3L | 20106518..20107396 | 347..1225 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:54:10 Download gff for
BS25304.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20099221..20099550 | 17..346 | 100 | -> | Plus |
| arm_3L | 20099618..20100496 | 347..1225 | 100 | | Plus |
BS25304.pep Sequence
Translation from 16 to 1224
> BS25304.pep
MPLLEAPADYLESSPDQSLQAELPILLAPPGPAALAQVRMPPPEVRLNQQ
NPAQQQQQRMQFNRRQLGRRNSFDRDVAIAEEEQHLPAFVHLLPVVLPQQ
GPEPTLDELLRRVTQRTDLEAVEQVRLRVISYTVSLSRLSLFLPRLQSLD
LSGSVLSSLRDLGYGLLQLTRLDISNCGLNSFDGTSGLPAIRVLIADGNM
IQRVDPLAELVHLRVLKARNNRISELGLLSFLGMCPQLQEVELQGNPVCR
LPLYRSLLARSVPTLQLLDGRVLNGEPAPVEMEEATSPASSDLESGSETT
AQRPNTAPAPEPVPIALNAAIRRQVSASSGSTPVAGSVLSLVRQRRRRSG
HAWVSSSSSSGSSSASSARSTRAPSMSSCSSNSSLDVQSSSHYVFSTQST
LD*
BS25304.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:07:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14185-PA | 402 | CG14185-PA | 1..402 | 1..402 | 1993 | 100 | Plus |
