Clone BS25305 Report

Search the DGRC for BS25305

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:253
Well:5
Vector:pDNR-Dual
Associated Gene/TranscriptCG33290-RA
Protein status:BS25305.pep: full length peptide match
Sequenced Size:548

Clone Sequence Records

BS25305.complete Sequence

548 bp assembled on 2011-07-25

GenBank Submission: KX800613

> BS25305.complete
GAAGTTATCAGTCGACATGTTAAAGTTTCTTTGGCTTTTACCCATTGTCA
CTATCGCTATACCTAAAATTACCCACGCTCAAAGGCCGTCTTTTGCTGGC
ATAAGACCTCCAGGCGGACTTACTCAGAAGGACAAGTACGCCCAAACTAA
AAATACAGCCCTGGAGAACTTTAATGGAGTTTCGGGACCCAAGGATACTA
CGCAAAAGAAAATTATCAACCTTCCTTATGGAGCACCGCAAAGGCCGCCA
ATGGGAGTTCCGCTGGTTCATCCCTCCGCTCCGGAGGAGTTGTTAGCCTC
GTACAGCCCCGTCAACAACGCTGCTGGATTTCCAGCTCAAACTGCCCCAG
ATAACAGCCGACTTCCCATCGATGCCCGAGGTGACAGGGACTGGGTGAAT
AGATTGAAGCAGCTGCCCGTGGACCAGCAGCCCTTCTGGCTTGTGAACTA
TCAAGCAATCGAAGCAATGAGGAACAATCCCAGACCCAATGTTGGAAATT
ATGAATGGCGTGGGAATTCGTTCGGCGGTTAAAAGCTTTCTAGACCAT

BS25305.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:09:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG33290-RA 516 CG33290-PA 1..516 17..532 2580 100 Plus
CG14567-RA 573 CG14567-PA 406..480 365..439 180 82.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:09:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG33290-RA 654 CG33290-RA 69..593 15..539 2610 99.8 Plus
CG14567-RA 725 CG14567-RA 502..576 365..439 180 82.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:08:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21542427..21542951 15..539 2610 99.8 Plus
3L 28110227 3L 21736290..21736350 464..404 185 86.9 Minus
3L 28110227 3L 21737855..21737929 439..365 180 82.7 Minus
Blast to na_te.dros performed on 2014-11-26 22:09:00 has no hits.

BS25305.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-25 14:58:03 Download gff for BS25305.complete
Subject Subject Range Query Range Percent Splice Strand
CG33290-RA 76..584 22..530 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:48:27 Download gff for BS25305.complete
Subject Subject Range Query Range Percent Splice Strand
CG33290-RA 76..584 22..530 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:52:42 Download gff for BS25305.complete
Subject Subject Range Query Range Percent Splice Strand
CG33290-RA 76..584 22..530 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:52:42 Download gff for BS25305.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21542434..21542942 22..530 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:48:27 Download gff for BS25305.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21535534..21536042 22..530 100   Plus

BS25305.pep Sequence

Translation from 16 to 531

> BS25305.pep
MLKFLWLLPIVTIAIPKITHAQRPSFAGIRPPGGLTQKDKYAQTKNTALE
NFNGVSGPKDTTQKKIINLPYGAPQRPPMGVPLVHPSAPEELLASYSPVN
NAAGFPAQTAPDNSRLPIDARGDRDWVNRLKQLPVDQQPFWLVNYQAIEA
MRNNPRPNVGNYEWRGNSFGG*

BS25305.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:04:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG33290-PA 171 CG33290-PA 1..171 1..171 923 100 Plus
CG14567-PA 190 CG14567-PA 1..190 5..171 433 47.4 Plus