Clone BS25313 Report

Search the DGRC for BS25313

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:253
Well:13
Vector:pDNR-Dual
Associated Gene/TranscriptCG13461-RA
Protein status:BS25313.pep: gold
Sequenced Size:446

Clone Sequence Records

BS25313.complete Sequence

446 bp assembled on 2011-07-25

GenBank Submission: KX800232

> BS25313.complete
GAAGTTATCAGTCGACATGCGATTCCTAATTGTCGTTGCTCTTGTGGCCT
TTTTGGCTGTTGGTCTTGTGGCTGCACGGCCAGCTGAGGATGAGGAGTCC
TCCATCCAGGATAACACCAATGAGGATTCGTCCAGTAATGATGGCGAGGG
AAACTCCGATGCTGCCGAGGAAGAACCTGCTGTTGAAGAAAGTCAAGATT
CTGGAAATGTGGATAACCAGGATGATGAAAATAGCGAGGATAATCAGGAG
GAGTCAGATAATGAATCAAGCGGAGATGATGAGGAAGATAACAACGGGTC
TGATGATAATACCGAATCGGATAATAATAACGATTCAGAAGGCGATCAGG
AGCAGGATGCTCCACCCAACAACCAGATTCGACCATTCGGACCTCTTCTC
ATCCAAGCAAGGCCCCTTTTCCTCGATTAAAAGCTTTCTAGACCAT

BS25313.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:09:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG13461-RA 414 CG13461-PA 1..414 17..430 2070 100 Plus
CG12310-RA 345 CG12310-PA 1..87 17..103 255 86.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:09:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG13461-RA 560 CG13461-RA 16..429 17..430 2070 100 Plus
CG12310-RA 544 CG12310-RA 42..128 17..103 255 86.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:09:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15052062..15052475 430..17 2070 100 Minus
3L 28110227 3L 15050679..15050765 103..17 255 86.2 Minus
Blast to na_te.dros performed on 2014-11-26 22:09:06 has no hits.

BS25313.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-25 14:58:04 Download gff for BS25313.complete
Subject Subject Range Query Range Percent Splice Strand
CG13461-RA 16..427 17..428 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:48:30 Download gff for BS25313.complete
Subject Subject Range Query Range Percent Splice Strand
CG13461-RA 16..427 17..428 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:52:44 Download gff for BS25313.complete
Subject Subject Range Query Range Percent Splice Strand
CG13461-RA 16..427 17..428 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:52:44 Download gff for BS25313.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15052064..15052475 17..428 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:48:30 Download gff for BS25313.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15045164..15045575 17..428 100   Minus

BS25313.pep Sequence

Translation from 16 to 429

> BS25313.pep
MRFLIVVALVAFLAVGLVAARPAEDEESSIQDNTNEDSSSNDGEGNSDAA
EEEPAVEESQDSGNVDNQDDENSEDNQEESDNESSGDDEEDNNGSDDNTE
SDNNNDSEGDQEQDAPPNNQIRPFGPLLIQARPLFLD*

BS25313.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:04:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG13461-PA 137 CG13461-PA 1..137 1..137 704 100 Plus
l(2)01289-PG 1191 CG9432-PG 812..901 25..114 193 33.3 Plus
l(2)01289-PM 1193 CG9432-PM 812..901 25..114 193 33.3 Plus
CG12310-PA 114 CG12310-PA 1..111 1..133 186 40.8 Plus
l(2)01289-PG 1191 CG9432-PG 788..890 24..114 180 34 Plus
l(2)01289-PM 1193 CG9432-PM 788..890 24..114 180 34 Plus
l(2)01289-PG 1191 CG9432-PG 759..861 24..114 167 32 Plus
l(2)01289-PM 1193 CG9432-PM 759..861 24..114 167 32 Plus
l(2)01289-PG 1191 CG9432-PG 745..831 24..114 164 31.9 Plus
l(2)01289-PM 1193 CG9432-PM 745..831 24..114 164 31.9 Plus
l(2)01289-PG 1191 CG9432-PG 765..869 24..119 163 32.4 Plus
l(2)01289-PM 1193 CG9432-PM 765..869 24..119 163 32.4 Plus
l(2)01289-PG 1191 CG9432-PG 836..928 25..114 159 33 Plus
l(2)01289-PM 1193 CG9432-PM 836..928 25..114 159 33 Plus
l(2)01289-PG 1191 CG9432-PG 870..977 25..122 158 31.5 Plus
l(2)01289-PM 1193 CG9432-PM 870..977 25..122 158 31.5 Plus
l(2)01289-PG 1191 CG9432-PG 729..822 30..120 156 26.6 Plus
l(2)01289-PM 1193 CG9432-PM 729..822 30..120 156 26.6 Plus
l(2)01289-PG 1191 CG9432-PG 740..829 25..114 155 29.7 Plus
l(2)01289-PM 1193 CG9432-PM 740..829 25..114 155 29.7 Plus
l(2)01289-PG 1191 CG9432-PG 840..938 24..120 148 25.3 Plus
l(2)01289-PM 1193 CG9432-PM 840..938 24..120 148 25.3 Plus
l(2)01289-PG 1191 CG9432-PG 848..948 24..119 147 26.7 Plus
l(2)01289-PM 1193 CG9432-PM 848..948 24..119 147 26.7 Plus
CG12017-PB 522 CG12017-PB 164..272 24..133 145 28.2 Plus