Clone BS25314 Report

Search the DGRC for BS25314

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:253
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptCG12934-RA
Protein status:BS25314.pep: gold
Sequenced Size:746

Clone Sequence Records

BS25314.complete Sequence

746 bp assembled on 2011-07-25

GenBank Submission: KX803739

> BS25314.complete
GAAGTTATCAGTCGACATGAAGGCAGCAATAATTTTGGCACTAATCGGTA
CAGTTTTGACGGCTCCGCCAGTCAGGGTGATGCCGAAACCAGGCAGTGAG
CTTGATCAGTACGCTCACATATTTGCAAAGGTACGACCACCGGGCCAGAA
GCACCAGAACATGGAGATTGAATTCCAGCCACAGCACCACAACTCTCTGC
CGAGCAACCAGGTCAATGCGGAAATCAATCATGTGGAGCCCAAGCAGCCT
CAGTACATGGAACAAAGTTCTTCTCAGGTCGAGTCGAGACCTCCTCACAC
CGTGGACTTTGAGATCAAGCCGGTGGAGCAGAAGCCACCCCAGCGATTGG
AGTTTGAGGTGAAGCCGCAGCACGAGCAAAACTCTCCTCAGGGACATTTG
GTTTCTTTGGGCGTCAAGCCCGTGGAGCAGAAGCCACCTCAGCACTTGGA
GGTGGAGATTAAGCAGCAGCAGCAACAACATTCTTCGCAAAATCATCAGG
TGGAACTGGAAATCAAGCAGGTGGAACAGAAGCCTCCACAGCACTTGGAA
ATTGAGATCAAGCCTGTTGACCAGAAGCCACCGCACCGTGTGGAGCTTGA
AGTCCAACAGCAGCATCACCAAAACTCTGCCCAGGGACACTTGGTTTCTT
TGGGAGCAGTGGAACAGAAGCAACAACACATCGATCATGAGCTGAAGAAT
TCCCATAAAATCGAGCTAGAATTTGTTTAGAAGCTTTCTAGACCAT

BS25314.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:09:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG12934-RB 714 CG12934-PB 1..714 17..730 3570 100 Plus
CG12934-RA 714 CG12934-PA 1..714 17..730 3570 100 Plus
CG12934-RB 714 CG12934-PB 293..395 552..654 230 81.6 Plus
CG12934-RB 714 CG12934-PB 536..638 309..411 230 81.6 Plus
CG12934-RA 714 CG12934-PA 293..395 552..654 230 81.6 Plus
CG12934-RA 714 CG12934-PA 536..638 309..411 230 81.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:09:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG12934-RB 943 CG12934-RB 25..738 17..730 3570 100 Plus
CG12934-RA 858 CG12934-RA 25..738 17..730 3570 100 Plus
CG12934-RB 943 CG12934-RB 317..419 552..654 230 81.6 Plus
CG12934-RB 943 CG12934-RB 560..662 309..411 230 81.6 Plus
CG12934-RA 858 CG12934-RA 317..419 552..654 230 81.6 Plus
CG12934-RA 858 CG12934-RA 560..662 309..411 230 81.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:09:12
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10648912..10649625 17..730 3570 100 Plus
2R 25286936 2R 10649204..10649306 552..654 230 81.6 Plus
2R 25286936 2R 10649447..10649549 309..411 230 81.6 Plus
Blast to na_te.dros performed 2014-11-26 22:09:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6810..6996 426..618 177 56.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6732..6888 462..624 162 57.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2353..2509 462..621 161 59.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2347..2559 426..642 156 55 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6934 426..640 149 53.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6739..6858 424..543 133 59.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6798..6946 426..580 131 56.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6760..6876 424..543 125 61 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2594..2684 424..516 118 61.7 Plus
roo 9092 roo DM_ROO 9092bp 1065..1143 462..543 115 62.2 Plus

BS25314.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-25 14:58:05 Download gff for BS25314.complete
Subject Subject Range Query Range Percent Splice Strand
CG12934-RA 30..743 17..730 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:48:33 Download gff for BS25314.complete
Subject Subject Range Query Range Percent Splice Strand
CG12934-RA 25..738 17..730 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:52:47 Download gff for BS25314.complete
Subject Subject Range Query Range Percent Splice Strand
CG12934-RA 25..738 17..730 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:52:47 Download gff for BS25314.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10648912..10649625 17..730 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:48:33 Download gff for BS25314.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6536417..6537130 17..730 100   Plus

BS25314.pep Sequence

Translation from 16 to 729

> BS25314.pep
MKAAIILALIGTVLTAPPVRVMPKPGSELDQYAHIFAKVRPPGQKHQNME
IEFQPQHHNSLPSNQVNAEINHVEPKQPQYMEQSSSQVESRPPHTVDFEI
KPVEQKPPQRLEFEVKPQHEQNSPQGHLVSLGVKPVEQKPPQHLEVEIKQ
QQQQHSSQNHQVELEIKQVEQKPPQHLEIEIKPVDQKPPHRVELEVQQQH
HQNSAQGHLVSLGAVEQKQQHIDHELKNSHKIELEFV*

BS25314.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:04:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG12934-PB 237 CG12934-PB 1..237 1..237 1247 100 Plus
CG12934-PA 237 CG12934-PA 1..237 1..237 1247 100 Plus