BS25314.complete Sequence
746 bp assembled on 2011-07-25
GenBank Submission: KX803739
> BS25314.complete
GAAGTTATCAGTCGACATGAAGGCAGCAATAATTTTGGCACTAATCGGTA
CAGTTTTGACGGCTCCGCCAGTCAGGGTGATGCCGAAACCAGGCAGTGAG
CTTGATCAGTACGCTCACATATTTGCAAAGGTACGACCACCGGGCCAGAA
GCACCAGAACATGGAGATTGAATTCCAGCCACAGCACCACAACTCTCTGC
CGAGCAACCAGGTCAATGCGGAAATCAATCATGTGGAGCCCAAGCAGCCT
CAGTACATGGAACAAAGTTCTTCTCAGGTCGAGTCGAGACCTCCTCACAC
CGTGGACTTTGAGATCAAGCCGGTGGAGCAGAAGCCACCCCAGCGATTGG
AGTTTGAGGTGAAGCCGCAGCACGAGCAAAACTCTCCTCAGGGACATTTG
GTTTCTTTGGGCGTCAAGCCCGTGGAGCAGAAGCCACCTCAGCACTTGGA
GGTGGAGATTAAGCAGCAGCAGCAACAACATTCTTCGCAAAATCATCAGG
TGGAACTGGAAATCAAGCAGGTGGAACAGAAGCCTCCACAGCACTTGGAA
ATTGAGATCAAGCCTGTTGACCAGAAGCCACCGCACCGTGTGGAGCTTGA
AGTCCAACAGCAGCATCACCAAAACTCTGCCCAGGGACACTTGGTTTCTT
TGGGAGCAGTGGAACAGAAGCAACAACACATCGATCATGAGCTGAAGAAT
TCCCATAAAATCGAGCTAGAATTTGTTTAGAAGCTTTCTAGACCAT
BS25314.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:09:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12934-RB | 714 | CG12934-PB | 1..714 | 17..730 | 3570 | 100 | Plus |
CG12934-RA | 714 | CG12934-PA | 1..714 | 17..730 | 3570 | 100 | Plus |
CG12934-RB | 714 | CG12934-PB | 293..395 | 552..654 | 230 | 81.6 | Plus |
CG12934-RB | 714 | CG12934-PB | 536..638 | 309..411 | 230 | 81.6 | Plus |
CG12934-RA | 714 | CG12934-PA | 293..395 | 552..654 | 230 | 81.6 | Plus |
CG12934-RA | 714 | CG12934-PA | 536..638 | 309..411 | 230 | 81.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:09:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12934-RB | 943 | CG12934-RB | 25..738 | 17..730 | 3570 | 100 | Plus |
CG12934-RA | 858 | CG12934-RA | 25..738 | 17..730 | 3570 | 100 | Plus |
CG12934-RB | 943 | CG12934-RB | 317..419 | 552..654 | 230 | 81.6 | Plus |
CG12934-RB | 943 | CG12934-RB | 560..662 | 309..411 | 230 | 81.6 | Plus |
CG12934-RA | 858 | CG12934-RA | 317..419 | 552..654 | 230 | 81.6 | Plus |
CG12934-RA | 858 | CG12934-RA | 560..662 | 309..411 | 230 | 81.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:09:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10648912..10649625 | 17..730 | 3570 | 100 | Plus |
2R | 25286936 | 2R | 10649204..10649306 | 552..654 | 230 | 81.6 | Plus |
2R | 25286936 | 2R | 10649447..10649549 | 309..411 | 230 | 81.6 | Plus |
Blast to na_te.dros performed 2014-11-26 22:09:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6810..6996 | 426..618 | 177 | 56.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6732..6888 | 462..624 | 162 | 57.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2353..2509 | 462..621 | 161 | 59.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2347..2559 | 426..642 | 156 | 55 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6934 | 426..640 | 149 | 53.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6739..6858 | 424..543 | 133 | 59.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6798..6946 | 426..580 | 131 | 56.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6760..6876 | 424..543 | 125 | 61 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2594..2684 | 424..516 | 118 | 61.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1065..1143 | 462..543 | 115 | 62.2 | Plus |
BS25314.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-25 14:58:05 Download gff for
BS25314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12934-RA | 30..743 | 17..730 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:48:33 Download gff for
BS25314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12934-RA | 25..738 | 17..730 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:52:47 Download gff for
BS25314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12934-RA | 25..738 | 17..730 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:52:47 Download gff for
BS25314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10648912..10649625 | 17..730 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:48:33 Download gff for
BS25314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6536417..6537130 | 17..730 | 100 | | Plus |
BS25314.pep Sequence
Translation from 16 to 729
> BS25314.pep
MKAAIILALIGTVLTAPPVRVMPKPGSELDQYAHIFAKVRPPGQKHQNME
IEFQPQHHNSLPSNQVNAEINHVEPKQPQYMEQSSSQVESRPPHTVDFEI
KPVEQKPPQRLEFEVKPQHEQNSPQGHLVSLGVKPVEQKPPQHLEVEIKQ
QQQQHSSQNHQVELEIKQVEQKPPQHLEIEIKPVDQKPPHRVELEVQQQH
HQNSAQGHLVSLGAVEQKQQHIDHELKNSHKIELEFV*
BS25314.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:04:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12934-PB | 237 | CG12934-PB | 1..237 | 1..237 | 1247 | 100 | Plus |
CG12934-PA | 237 | CG12934-PA | 1..237 | 1..237 | 1247 | 100 | Plus |