BS25316.complete Sequence
803 bp assembled on 2011-07-25
GenBank Submission: KX802657
> BS25316.complete
GAAGTTATCAGTCGACATGAAGTTGGTCTGGATGTTGATGTCCTTGCAGC
TAATGCTTTTGGCAACTGCTCTTAGTGCCAGGCAATGTGTCAAGCCAACT
GCTTCACCAAAGCCCCCTGAGGATCCTGACGACCCCACTGATGATCCCTG
GGATCCCACAGATGACTCATCGGAGGACCCATCCGATTCGACCGATGAAC
CATGGAAGCCCACTGCTAAGCCCACAGTAGTACCAACTGAACCGCCCTCG
AACATTACATCTACTGAAAATCCATCGGAGCCAACTGAAAATCCATTGAA
TCCCACGGGAAGTCCCACCAACGACGAACCATCGGAGCCAACCGAAGAAT
CCACTGAAAATCCATCGGATCCCACAGGACAGCCCACTGGAGAAACGTCT
AATCCATCAGATCAACCCACTGACAGTCCCACAGGTCAACCGACTCAAGA
AACAACTGAAGAGACTAAAATACCGGCGGGGGAAACCACCAATGAAGGTA
CTTCGGATTCCACTGAAGAGCCCACTGGAGAACCATCAATTCCCACGCAT
GAGCCAGAAGAATCCTCGGGCGATCCATCAGATCCGACAAGTGCGACCAC
CCAGACAATTCCCAACGTGGATGCGAACGCCTCCTGTAGAGCTCATCAAG
GTGTGCAATTTCTGCCACATCCGTACGATTGTCATTTATACATACATTGC
GATGGAGATATTGGATTCATCAAGGATTGTCCAAGTGATCTGTACTGGAA
CTCGGTAAACCAGACTTGCGACAAGACCTGTGCCTAAAAGCTTTCTAGAC
CAT
BS25316.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:18:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14125-RA | 771 | CG14125-PA | 1..771 | 17..787 | 3855 | 100 | Plus |
| CG14125-RB | 792 | CG14125-PB | 29..792 | 24..787 | 3820 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:18:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14125-RA | 839 | CG14125-RA | 18..788 | 17..787 | 3855 | 100 | Plus |
| CG14125-RB | 860 | CG14125-RB | 46..809 | 24..787 | 3820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:18:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11974996..11975759 | 24..787 | 3820 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:18:57 has no hits.
BS25316.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-25 15:09:02 Download gff for
BS25316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14125-RA | 18..786 | 17..785 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:54:04 Download gff for
BS25316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14125-RA | 18..786 | 17..785 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:57:26 Download gff for
BS25316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14125-RA | 18..786 | 17..785 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:57:26 Download gff for
BS25316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11974990..11975757 | 17..785 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:54:04 Download gff for
BS25316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11968090..11968857 | 17..785 | 99 | | Plus |
BS25316.pep Sequence
Translation from 16 to 786
> BS25316.pep
MKLVWMLMSLQLMLLATALSARQCVKPTASPKPPEDPDDPTDDPWDPTDD
SSEDPSDSTDEPWKPTAKPTVVPTEPPSNITSTENPSEPTENPLNPTGSP
TNDEPSEPTEESTENPSDPTGQPTGETSNPSDQPTDSPTGQPTQETTEET
KIPAGETTNEGTSDSTEEPTGEPSIPTHEPEESSGDPSDPTSATTQTIPN
VDANASCRAHQGVQFLPHPYDCHLYIHCDGDIGFIKDCPSDLYWNSVNQT
CDKTCA*
BS25316.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:06:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14125-PA | 256 | CG14125-PA | 1..256 | 1..256 | 1420 | 100 | Plus |
| CG14125-PB | 263 | CG14125-PB | 8..263 | 1..256 | 1408 | 98.8 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1422..1668 | 28..251 | 219 | 28.8 | Plus |
| Mur89F-PC | 2158 | CG4090-PC | 1616..1855 | 32..252 | 214 | 32.4 | Plus |
| Mur89F-PB | 2159 | CG4090-PB | 1616..1855 | 32..252 | 214 | 32.4 | Plus |
