BS25337.complete Sequence
2636 bp assembled on 2011-08-05
GenBank Submission: KX801816
> BS25337.complete
GAAGTTATCAGTCGACATGAGCAGTCCCAGGGATAAGGCGGAGCAGGTGT
ACGAGGTGAAGGCTCCACATGCCGGTGCAGAGGGTCACACGTTCCTTGTG
AGTCCCGTGGACCCCACTCCGATCCTAGCGCCCATTCTCACCGCTGTGCC
TGTGATGAAAGCACCGGATTCGCCTGCTTCAATGGACAAGACCAAGGAGA
TGGAGGAGCTGGATGATGAGCAGCCGAGCTGCAGTTCCCAGGCGGTGGTG
CCGTTGTCCTCATCGCTGCCCTGCAAGCTGCTCCGCATGCATGCCAGACG
CTCGGCCCAGGCGCTGCTCCACCAAATGGAATCGATGGACTCTCAGCTGG
GCAGCAGCAATGGCAGCACCTCGGAGGATACTTCACCCTCTGCTCCGCCC
ATGTCGCCCACTGACCACCAACTGGTGGATGTGGGCATGGGTTCCTCCAT
TGGGGACTCGGATGAATCGTCGGAAGAGGGTGATGAGCTGAAGCCCCTGG
CCGTGGACAATCACATCATAGCCGAGGTGGACCTAACCGAGCGCCAGACT
ACGCCACCGGCCGTCTTGAGTGAGGCGAATTTGGAGAAGTTCCGTAAGCA
CCAGATGGATAACATCTATCTACATCCTAACTTCACTCTGGATGCTTCTC
CACCTCCGGCGGTCGCACCAGCCAACTCACCCGTTCTGGAGGCCAAGAGA
ACCCATCGTTCGTTCCTCACCATGAAGAAGGAAAAGGAGGTGGAGCCGCC
GCAAGAGAAGGAGCAGGAAGTGCCGGTACACCAGGAACAGGATACTGAGC
CCCAAGGACCCAATGAGATAGACACACTAGATCCCTCACTCATTCCCAGC
GAGGAACTGGCAGCCGAAATCACCGATGCCGTGGAGTTCTACTTCTCCAA
TGAGAGCATCCTGAAGGATGCATTCCTGCTGAAACATGTGCGACGCAACA
AGGAGGGTTTCGTCAGCCTTAAACTGGTGTCCAGCTTCAAGAGGGTGCGC
CAACTGACCAGGGAGTGGAAGGTGGTTGGAGATGCAGTGCGTCGCAAGTC
CCGCAAGATCGAGCTGAATGATGTGGGCACCAAGGTGCGCAGAATCGAAC
CGCTGCCCAGTTTCGATGAAACCATGCCCTCTCGCACGATCGTTGCCTGT
GATCTGCCACTGGACAAGCTAACCATCGAAAAGGTATCGGATCTATTCTC
GCCATGCGGAGAGATTGCCCTCATACGCATTCTCAAGCCCGGAATGGCCA
TTCCCGTGGATGTGCGTCAGTTCATGAACAAGTATCCAGAACTGCAGCAA
AAGGAGTGTGCTCTAGTGGAGTACTTAGAATCCTCTTCCGCCAGGGATGC
CCGTCATCTGAATGGCCCCTTTCAGGTCTACGAGATGGTGGCGCCCAAGA
AAAAGACCGGCAAGAAGGCAGCCGTCATCCAGATCGCCGCTCCGGTGGCC
CGGATGGTGGAGAATTATCGCTACTACAACGATGCCAACTACGAGCGGAG
TCGAGGTGGCAGCTTCTCCGGCCACGAAACTGTACCGGATCTGCGCTTCA
AACTCAAGCGCAACAACTCGGACTTCCAGCCCAGTTACTACCAACAAACG
GGGCCCAGCTACCATGCCAATCCGTATCAGCATTATCAGCCCCGTGGGAG
CATTGGCAACCAGAACCAGGAGGTGGGTCCCAATGGTTTTTTCGGCTATG
GTCCCAGGCGATACAGCAACACATCGACAATTTCGGCCAACACAGCGGCC
GCCTTGGGCGATGTTTCGCCTATATCTTCTGCTGTCAATTCAGGCGGTAA
TCCGATGGTGTCTGGTATAAGCAGTCTGCAGCGCCGTCTGTCCAACTGCT
CCGAGCAGAACTACACTCCAGAAGTCAATCCTTCGATGTCACGAAGGGCC
AGCAATTGCTCGGAAACGGGAGGAGTTCCCCAACGTCGCGATTCGAACTG
TTCGGAGAGTTGTCCATGCTCCCGAAGGGTCTCGGACTTTGCTCAGACGA
CAGACACTAGTTACAGAAAGACCTCGGTGTGTTCGAATGGCAGCTGTCCG
GGCAATAATCAGAACCAGGAGCGTCGCTTCTCCAACGGATCCATGCAGTT
CGAGCGAACCTTCTCGAATGCCAGCGAGAGCAGTGGCTTCTATCGTCGCC
CGTCGAACGATTTCAATATCGAGCGGGAGCCCATCCAAACCGATCAGCTG
GTGGGTGGAGGAGGCGGTGGCTACCAGGTGTGGCCACGTCGTTACTCCAA
CAACTTCCAGCAGCTGAGCAGCAAGCTGGCGGCATATGATAATGCTCAGT
ATATCGGAGGAAGACGTATATCCACGGACTCGGGATACGATCGTCGCTGC
TCGTTTGGATCGGAAGGCTTCGAAGGATCTCCACGATCTCGCACCGGTAG
CTTCCTGAGCAACTACAAGCACGGCGGCGGCGATGGCTACGATGGCCAGC
CAAGATCCCGAACCGGTAGCTTCCTCGACGGATCTCCTCGGTCGCGTTCC
GGTTCGTTTGCCCAGCGAGCTGCCGAGAGCCTGGTGCGCACTCCAATGGG
TCCAGATGGTAGCAAGGGATTCGGCCAGAGGGCCAGGAAATTCGGACAGA
CCATATCGCCCGTAAATTAGAAGCTTTCTAGACCAT
BS25337.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:30:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17386-RB | 2604 | CG17386-PB | 1..2604 | 17..2620 | 13020 | 100 | Plus |
| CG17386-RA | 2604 | CG17386-PA | 1..2604 | 17..2620 | 13020 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:30:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17386-RB | 4441 | CG17386-RB | 715..3321 | 16..2622 | 13035 | 100 | Plus |
| CG17386-RA | 4271 | CG17386-RA | 715..3321 | 16..2622 | 13035 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:30:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14421038..14423644 | 16..2622 | 13035 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:30:20 has no hits.
BS25337.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-05 10:05:43 Download gff for
BS25337.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17386-RA | 699..3302 | 17..2620 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:55:34 Download gff for
BS25337.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17386-RA | 716..3319 | 17..2620 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:26:52 Download gff for
BS25337.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17386-RA | 716..3319 | 17..2620 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:26:52 Download gff for
BS25337.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14421039..14423642 | 17..2620 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:55:34 Download gff for
BS25337.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10308544..10311147 | 17..2620 | 100 | | Plus |
BS25337.pep Sequence
Translation from 16 to 2619
> BS25337.pep
MSSPRDKAEQVYEVKAPHAGAEGHTFLVSPVDPTPILAPILTAVPVMKAP
DSPASMDKTKEMEELDDEQPSCSSQAVVPLSSSLPCKLLRMHARRSAQAL
LHQMESMDSQLGSSNGSTSEDTSPSAPPMSPTDHQLVDVGMGSSIGDSDE
SSEEGDELKPLAVDNHIIAEVDLTERQTTPPAVLSEANLEKFRKHQMDNI
YLHPNFTLDASPPPAVAPANSPVLEAKRTHRSFLTMKKEKEVEPPQEKEQ
EVPVHQEQDTEPQGPNEIDTLDPSLIPSEELAAEITDAVEFYFSNESILK
DAFLLKHVRRNKEGFVSLKLVSSFKRVRQLTREWKVVGDAVRRKSRKIEL
NDVGTKVRRIEPLPSFDETMPSRTIVACDLPLDKLTIEKVSDLFSPCGEI
ALIRILKPGMAIPVDVRQFMNKYPELQQKECALVEYLESSSARDARHLNG
PFQVYEMVAPKKKTGKKAAVIQIAAPVARMVENYRYYNDANYERSRGGSF
SGHETVPDLRFKLKRNNSDFQPSYYQQTGPSYHANPYQHYQPRGSIGNQN
QEVGPNGFFGYGPRRYSNTSTISANTAAALGDVSPISSAVNSGGNPMVSG
ISSLQRRLSNCSEQNYTPEVNPSMSRRASNCSETGGVPQRRDSNCSESCP
CSRRVSDFAQTTDTSYRKTSVCSNGSCPGNNQNQERRFSNGSMQFERTFS
NASESSGFYRRPSNDFNIEREPIQTDQLVGGGGGGYQVWPRRYSNNFQQL
SSKLAAYDNAQYIGGRRISTDSGYDRRCSFGSEGFEGSPRSRTGSFLSNY
KHGGGDGYDGQPRSRTGSFLDGSPRSRSGSFAQRAAESLVRTPMGPDGSK
GFGQRARKFGQTISPVN*
BS25337.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:15:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17386-PB | 867 | CG17386-PB | 1..867 | 1..867 | 4523 | 100 | Plus |
| CG17386-PA | 867 | CG17386-PA | 1..867 | 1..867 | 4523 | 100 | Plus |
