BS25351.complete Sequence
1880 bp assembled on 2011-08-05
GenBank Submission: KX803466
> BS25351.complete
GAAGTTATCAGTCGACATGGATAGCAGCAAGTTGTTGAAGAATGTCTACG
GCATCGACATTCACTTCGAAGATCTCGTCTACCAGGTCAACGTACCCAAA
AAGCCAGAGAAGAAGTCCGTGCTGAAGGGCATCAAGGGTACGTTCAAGTC
GGGCGAACTTACCGCCATAATGGGCCCCTCGGGGGCGGGCAAATCTAGCC
TTATGAACATCCTCACCGGTCTGACCAAATCCGGCGTCAGCGGGAAGATC
GAGATCGGGAAGGCGCGCAAACTGTGCGGCTACATTATGCAGGACGATCA
CTTCTTTCCCTACTTCACCGTCGAGGAGACCATGCTGATGGCGGCCACAC
TTAAAATCTCCAATCAGTGCGTCAGTCTGAAGGAAAAGCGAACTCTGATC
GACTACCTGCTGAACTCGCTGAAGCTGACGAAGACGCGGCAGACGAAGTG
CTCCAACCTGAGTGGCGGCCAGAAGAAGCGCCTATCCATCGCCCTGGAAC
TGATAGACAATCCAGCTGTGCTATTTTTAGACGAGCCCACAACCGGATTG
GACAGCTCCTCCTCCTTCGACACCATCCAGCTGCTGCGCGGCCTGGCCAA
CGAGGGACGTACCATCGTGTGCACCATCCACCAGCCGTCGACGAACATCT
ACAATCTCTTTAACCTGGTCTACGTGCTAAGCGCGGGTCGATGCACCTAC
CAGGGCACGCCCCAGAACACGGTCATGTTTCTCAGCAGCGTGGGTCTGGA
GTGCCCGCCCTACCACAATCCCGCCGACTTCCTGCTGGAATGCGCGAACG
GGGACTACGGCGATCAGACGGAGGCTCTGGCGGAAGCGGCCAAGGACATA
CGCTGGAGATACGATCAGCAGTTGATGCAGGGCGAGGATGCCGATGCGCC
CAGCGAGACGCAGGTGGCCAAGTTCAATGAATCTCAGTCACCGGGCCAGG
TCCAGGTGCAGGTGCAGAAGATCGAGATCCAGAACATGGAGTCGTCGAAG
GATCTGACCAAGCACACCTATCCGCCCACGGAATACATGCGACTGTGGCT
GCTCATCGGCCGGTGTCATCTTCAGTTCTTCAGGGATTGGACTCTTACCT
ACCTGAAGCTGGGCATTCATGTGCTCTGTTCCATTTTGATTGGCTTGTTC
TTCGGCGATTCGGGCAGCAATGCCACCAAGCAAATTTCCAATGTCGGCAT
GATCATGATCCATTGCGTATATCTCTGGTACACCACCATTATGCCGGGCA
TATTGAGATATCCCGCCGAAATAGAGATCATCAGAAAGGAGACCTTTAAC
AACTGGTACAAATTGCGAACCTATTACCTTGCCACCATCATCACATCCAC
ACCAGTCCATATCATCTTCTCGACGGTGTATATAACGATAGGATATCTGA
TGACCGATCAGCCCGTGGAAATGGATCGATTTGTTAAGTACCTACTAAGT
GCGGTGGTGGTCACGATATGTGCGGATGGTCTGGGCGTCTTTCTGGGCAC
CGTGCTGAATCCAGTGAATGGAACTTTCGTTGGCGCCGTTTCGACGTCGT
GTATGCTGATGTTTTCCGGCTTCCTCATCCTGCTGAATCACATTCCGGCT
GCCATGCGATTCATGGCCTATATATCGCCACTTCGCTACGCCCTCGAAAA
CATGGTGATCTCGCTGTACGGCAATCAGCGTGGCCAGTTGATCTGCCCGC
CCACGGAGTTCTATTGCCACTTCAAGAACGCTGTGACTGTGCTGCGACAA
TTTGGTATGGAGGACGGCGACTTTGGTCACAACATTCTCATGATCCTCAT
CCAAATAGCGATATTCAAGGTTCTGTCCTACTTTACGCTGAAGCACAAAA
TCAAGACGAACTGAAAGCTTTCTAGACCAT
BS25351.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:20:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31689-RG | 1848 | CG31689-PG | 1..1848 | 17..1864 | 9075 | 99.4 | Plus |
| CG31689-RF | 1848 | CG31689-PF | 1..1848 | 17..1864 | 9075 | 99.4 | Plus |
| CG31689-RE | 1848 | CG31689-PE | 1..1848 | 17..1864 | 9075 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:20:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31689-RG | 2530 | CG31689-RG | 353..2200 | 17..1864 | 9075 | 99.4 | Plus |
| CG31689-RF | 2476 | CG31689-RF | 299..2146 | 17..1864 | 9075 | 99.4 | Plus |
| CG31689-RE | 2704 | CG31689-RE | 527..2374 | 17..1864 | 9075 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:20:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2738075..2738382 | 783..1090 | 1525 | 99.7 | Plus |
| 2L | 23513712 | 2L | 2737029..2737321 | 105..397 | 1435 | 99.3 | Plus |
| 2L | 23513712 | 2L | 2737662..2737900 | 544..782 | 1180 | 99.6 | Plus |
| 2L | 23513712 | 2L | 2739088..2739298 | 1516..1726 | 1010 | 98.6 | Plus |
| 2L | 23513712 | 2L | 2738446..2738615 | 1090..1259 | 850 | 100 | Plus |
| 2L | 23513712 | 2L | 2738869..2739024 | 1361..1516 | 765 | 99.4 | Plus |
| 2L | 23513712 | 2L | 2737421..2737567 | 397..543 | 720 | 99.3 | Plus |
| 2L | 23513712 | 2L | 2739362..2739500 | 1726..1864 | 680 | 99.3 | Plus |
| 2L | 23513712 | 2L | 2738683..2738783 | 1260..1360 | 490 | 99 | Plus |
| 2L | 23513712 | 2L | 2736340..2736430 | 17..107 | 455 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:20:40 has no hits.
BS25351.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-05 10:05:34 Download gff for
BS25351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31689-RA | 511..2357 | 17..1863 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:51:32 Download gff for
BS25351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31689-RE | 527..2373 | 17..1863 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:23:35 Download gff for
BS25351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31689-RE | 527..2373 | 17..1863 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:23:35 Download gff for
BS25351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2738869..2739024 | 1361..1516 | 99 | -> | Plus |
| 2L | 2739089..2739297 | 1517..1725 | 98 | -> | Plus |
| 2L | 2739362..2739499 | 1726..1863 | 99 | | Plus |
| 2L | 2736340..2736430 | 17..107 | 100 | -> | Plus |
| 2L | 2737032..2737321 | 108..397 | 99 | -> | Plus |
| 2L | 2737422..2737567 | 398..543 | 99 | -> | Plus |
| 2L | 2737662..2737900 | 544..782 | 99 | -> | Plus |
| 2L | 2738075..2738382 | 783..1090 | 99 | -> | Plus |
| 2L | 2738447..2738615 | 1091..1259 | 100 | -> | Plus |
| 2L | 2738683..2738783 | 1260..1360 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:51:32 Download gff for
BS25351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2736340..2736430 | 17..107 | 100 | -> | Plus |
| arm_2L | 2737032..2737321 | 108..397 | 99 | -> | Plus |
| arm_2L | 2737422..2737567 | 398..543 | 99 | -> | Plus |
| arm_2L | 2737662..2737900 | 544..782 | 99 | -> | Plus |
| arm_2L | 2738075..2738382 | 783..1090 | 99 | -> | Plus |
| arm_2L | 2738447..2738615 | 1091..1259 | 100 | -> | Plus |
| arm_2L | 2738683..2738783 | 1260..1360 | 99 | -> | Plus |
| arm_2L | 2738869..2739024 | 1361..1516 | 99 | -> | Plus |
| arm_2L | 2739089..2739297 | 1517..1725 | 98 | -> | Plus |
| arm_2L | 2739362..2739499 | 1726..1863 | 99 | | Plus |
BS25351.pep Sequence
Translation from 16 to 1863
> BS25351.pep
MDSSKLLKNVYGIDIHFEDLVYQVNVPKKPEKKSVLKGIKGTFKSGELTA
IMGPSGAGKSSLMNILTGLTKSGVSGKIEIGKARKLCGYIMQDDHFFPYF
TVEETMLMAATLKISNQCVSLKEKRTLIDYLLNSLKLTKTRQTKCSNLSG
GQKKRLSIALELIDNPAVLFLDEPTTGLDSSSSFDTIQLLRGLANEGRTI
VCTIHQPSTNIYNLFNLVYVLSAGRCTYQGTPQNTVMFLSSVGLECPPYH
NPADFLLECANGDYGDQTEALAEAAKDIRWRYDQQLMQGEDADAPSETQV
AKFNESQSPGQVQVQVQKIEIQNMESSKDLTKHTYPPTEYMRLWLLIGRC
HLQFFRDWTLTYLKLGIHVLCSILIGLFFGDSGSNATKQISNVGMIMIHC
VYLWYTTIMPGILRYPAEIEIIRKETFNNWYKLRTYYLATIITSTPVHII
FSTVYITIGYLMTDQPVEMDRFVKYLLSAVVVTICADGLGVFLGTVLNPV
NGTFVGAVSTSCMLMFSGFLILLNHIPAAMRFMAYISPLRYALENMVISL
YGNQRGQLICPPTEFYCHFKNAVTVLRQFGMEDGDFGHNILMILIQIAIF
KVLSYFTLKHKIKTN*
BS25351.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:15:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31689-PG | 615 | CG31689-PG | 1..615 | 1..615 | 3202 | 100 | Plus |
| CG31689-PF | 615 | CG31689-PF | 1..615 | 1..615 | 3202 | 100 | Plus |
| CG31689-PE | 615 | CG31689-PE | 1..615 | 1..615 | 3202 | 100 | Plus |
| CG31689-PB | 615 | CG31689-PB | 1..615 | 1..615 | 3202 | 100 | Plus |
| CG31689-PA | 615 | CG31689-PA | 1..615 | 1..615 | 3202 | 100 | Plus |
