BS25362.complete Sequence
3029 bp assembled on 2011-08-05
GenBank Submission: KX800680
> BS25362.complete
GAAGTTATCAGTCGACATGGCTGAAATCAGGCTAGTTGTGGTTCTACTGG
TCCTTATGACCACCTGTATCTATACACTTCAAGCCAGTGACAGTAATTCC
TCCGTGGCAACCACCTTGGGCGTTTTGTTCGAGAGGGCTCCCGAATCAGC
GGTGGCCCCGAAAGGAGATGAGGTGGTCTTCGAGTGCGAGCTGAATCTGA
AACCTGATCGCCTGGAGTGGCGGTTTAGACGTGGTGATTCCTCGGAGCCC
TATCTATACCTAAGGCCCTCGGCTGGCTATAACGTGACCAGCGGAAGCGA
TGGTCTTGCCTGGAGACTGCGCATCTATGTGAGTGCCCAAACGGCTGGGG
ACTACCAGTGTGTGGCTTGGTATGGCCCGGGTGCACTGGCTTCCACGCCA
GCCCGCTTGGCCTTGGTCTCGATTGCTTTGGACGTCGGCCAGGGATCCAT
GGGGGCCAGGAGCTCCATCCGCTGGAGCGTGGCGCCCAAAAACTGCCTGC
TCATTCGTTGCGGCAGCGTAATATCGAATCCGCCGGCTATTTGGAGCTTC
TACAGAAACGGAAAGAAGCTACCTCAATCGGAGCTGCTGCCTGGCGCTGC
GGGGGCATTGGTTTTGGATACGGTCACCGCCAAAGATGCGGGTAACTACT
CGTGCGTGGCCACGAACTCCATAACAGGCGATGAACTTAGGCTCCCCCAA
ACTATTGAACTAAGAGTGGACTACACAGATAGGACACCTCCGTACTTTCT
ACAACGTCCACCCATCGAATACTCAGCTCGTCCCGGAGAAACAGTGGTGC
TCGAGTGTCCTGGCGTGGGATCCCCACGACCCCGAGTCATTTGGAGTAGT
CCCAATGTGGTTGAGATCTATAATAATAGAAGCACCATCCTGTCCTACGG
CCTGCAAATCACCGATGTGAAGCCCGAGGATCAGGGTTCCTATATCTGCA
TGCTGGACAATGGTATTGCACCACCGATCGATCACACCATCAAGTTGAGT
GTTTTGCAGCGGCCCACGATCTTAAGAGGACCGGCCGCCACTCTGACGAA
TGAGAGCAATCCTTTGCTGCTGGATTGCTCCGCCTCGGGGAATCCCCAAC
CCGATATTTATTGGCTTATAAACGGTGAGGATGCCACCAAAGATCCGGAG
GCTGTGGTGGATAACCGGAGCCTGCAGCTGAAGCGAGTTCAAAAGCGTCA
CGCTGGCGTGGTTCAGTGCTTTGCAAAGAACATTTTGGGAGAGACGAGCG
AGGGAAACATATTGCGCGTGAATCCCCTGGAAATCACCGGCGAGGATGAC
GAACCACTTGGCGAAGTTCCCGTGTGGCCAGTTCATGAATCCAACACTGG
AATGGGCACCTCGTCAACATCTGGAGGCTCCAAAAACAAGAGCGGCAGAC
GAAAGTTTAAGGCGAGCATGGTGCCTCCGTCACGACCCAATGTCACCCGT
CTGTCGGACGAGTCCGTGATGCTGCGCTGGAGTGTGCCACAAAACTCTGG
ACTCCAGATCACCTTTTTCAAGGTGCAGTATCGCATGTTGGGCGACGGAA
AAAATCGGAGGAAGAACTGGCAGACGACCAGCGACAATATCCCGTACGGA
AACGCGCACGGATCCGGGCCTGGCCAGGGGAACAGTCACTGGCGGGCGCG
GAACCGGGACAGGGAGTATGAAATGGGCAATCCGCCCAAGAACTTCACCT
CCTCCGTTACGGGACTGACCGCCGGCAAGTACTACCGCTTCCGGATCGTG
GCGGTGTACTCCAATAACGACAACAAGGAGGGCAACACCTCCCTCAAGTT
CTTCCTGCAGAATGGAACGTCCAAGTCGAATCTGCCAGTGCCGGAACTAC
GCGAGGTGGAGACGCTTTCCGAGTCGGCCGTGGTGCTCCATTGGTCCCTG
GTATCCTCGACTCAAAATGAGGATATAGACGGGTACTATGCCTACTATAG
GCCAGCGGACTCAGCAGCGGAGTATTTGAAGGCCACGGTGGATGGCGGAA
TGAGCAGGAGCTTCAAGATAGACCTCCTTCGTCCAGGAACCCCTTATGAG
TTCAAATTGCAATCGTTCAACTCCGACGCAGCCTCTGAATTCAGTGCTAT
TCGGCAAGCGAGGACCAGAAAAACGCACGAGCAACCGGCTTCATCTTCGG
CCACGCCAGTGCCAGCCAATAAGGCAGTGGAACAGCACCAGAACTCCTTA
TATCCACTGATCGCAGGTGCCGCTGGCGGAGGCATACTACTCCTCATCGC
CTCATTGGTGGTCTGCCTTTGCCTAAAGAGACGGGAAAACTCTCAGCCGG
AGGATGAGAACAAACCGCAATTGGAACACATTCAAGCGGACTTTGTTACC
TCCGCCGTCCTGGGAGTTGGTGGCCACCACAAAAGTGGCGATGTAAGGCG
CCTCAACGGAGTGATTCCGAGGATGAATATTACGCCCAATCCGCTGGCCC
AGGAAACGGCATCCGATAAGAACAACTCTGGACTGCATCAGAATGGCCTT
CACCACGCACAGCCGTACCATCCGCCTGGCACGCCCACTCTGATGCACAA
GCGACTGGACTACCACCAGCAGCCGCCGCCGGTGCCTCCGCACTCGGCCT
ATTACCAACAGGCACCCACGCACCAGCCGTCGCCGATGATGGAGCGCAGT
GTCAGGGGTCACCAGCAGCCCGGGGGCTTTCATATGGAGGAGGGCACACC
CACGCCGACCAGGATACCATCCCTGCGGCGACAGCGACGCACCTCGGGCA
ACCAGCAGGTGCACAACAGCCACAGCAATCTCAATATTGGCCTGAGCCAC
CACAACAACAACAACAACAACCTGCCGCCGCACCACCAGCATCTGCACCA
CCACCCCGGCCATCCGGGTGGCCTGGTGGGCATACCCATCGTGCCAGGGA
GCCCTAGGGTCCAGAGATCGCCGATGCCGAGCAGGGCGATGATCAAGAGG
ACGCGCCTGGGCAGCCACACGGACAACATATCGTCGGGCAGTCTGAACAG
TATTGAGGTGTGAAAGCTTTCTAGACCAT
BS25362.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:34:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| boi-RF | 2997 | CG32796-PF | 1..2997 | 17..3013 | 14970 | 100 | Plus |
| boi-RE | 2997 | CG32796-PE | 1..2997 | 17..3013 | 14970 | 100 | Plus |
| boi-RB | 2997 | CG32796-PB | 1..2997 | 17..3013 | 14970 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:34:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| boi-RF | 4509 | CG32796-RF | 629..3625 | 17..3013 | 14970 | 100 | Plus |
| boi-RE | 4316 | CG32796-RE | 436..3432 | 17..3013 | 14970 | 100 | Plus |
| boi-RB | 4223 | CG32796-RB | 343..3339 | 17..3013 | 14970 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:34:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2450903..2452129 | 1243..17 | 6120 | 99.9 | Minus |
| X | 23542271 | X | 2446890..2447598 | 2120..1412 | 3545 | 100 | Minus |
| X | 23542271 | X | 2445051..2445595 | 3013..2469 | 2725 | 100 | Minus |
| X | 23542271 | X | 2446642..2446824 | 2303..2121 | 915 | 100 | Minus |
| X | 23542271 | X | 2450670..2450840 | 1412..1242 | 855 | 100 | Minus |
| X | 23542271 | X | 2446411..2446578 | 2470..2303 | 840 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:34:06 has no hits.
BS25362.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-05 10:05:47 Download gff for
BS25362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boi-RE | 396..3391 | 17..3012 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:57:05 Download gff for
BS25362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boi-RB | 343..3338 | 17..3012 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:28:01 Download gff for
BS25362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boi-RB | 343..3338 | 17..3012 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:28:01 Download gff for
BS25362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2445052..2445593 | 2471..3012 | 100 | <- | Minus |
| X | 2446411..2446577 | 2304..2470 | 100 | <- | Minus |
| X | 2446642..2446824 | 2121..2303 | 100 | <- | Minus |
| X | 2446890..2447597 | 1413..2120 | 100 | <- | Minus |
| X | 2450670..2450838 | 1244..1412 | 100 | <- | Minus |
| X | 2450903..2452129 | 17..1243 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:57:05 Download gff for
BS25362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2339085..2339626 | 2471..3012 | 100 | <- | Minus |
| arm_X | 2340444..2340610 | 2304..2470 | 100 | <- | Minus |
| arm_X | 2340675..2340857 | 2121..2303 | 100 | <- | Minus |
| arm_X | 2340923..2341630 | 1413..2120 | 100 | <- | Minus |
| arm_X | 2344703..2344871 | 1244..1412 | 100 | <- | Minus |
| arm_X | 2344936..2346162 | 17..1243 | 99 | | Minus |
BS25362.pep Sequence
Translation from 16 to 3012
> BS25362.pep
MAEIRLVVVLLVLMTTCIYTLQASDSNSSVATTLGVLFERAPESAVAPKG
DEVVFECELNLKPDRLEWRFRRGDSSEPYLYLRPSAGYNVTSGSDGLAWR
LRIYVSAQTAGDYQCVAWYGPGALASTPARLALVSIALDVGQGSMGARSS
IRWSVAPKNCLLIRCGSVISNPPAIWSFYRNGKKLPQSELLPGAAGALVL
DTVTAKDAGNYSCVATNSITGDELRLPQTIELRVDYTDRTPPYFLQRPPI
EYSARPGETVVLECPGVGSPRPRVIWSSPNVVEIYNNRSTILSYGLQITD
VKPEDQGSYICMLDNGIAPPIDHTIKLSVLQRPTILRGPAATLTNESNPL
LLDCSASGNPQPDIYWLINGEDATKDPEAVVDNRSLQLKRVQKRHAGVVQ
CFAKNILGETSEGNILRVNPLEITGEDDEPLGEVPVWPVHESNTGMGTSS
TSGGSKNKSGRRKFKASMVPPSRPNVTRLSDESVMLRWSVPQNSGLQITF
FKVQYRMLGDGKNRRKNWQTTSDNIPYGNAHGSGPGQGNSHWRARNRDRE
YEMGNPPKNFTSSVTGLTAGKYYRFRIVAVYSNNDNKEGNTSLKFFLQNG
TSKSNLPVPELREVETLSESAVVLHWSLVSSTQNEDIDGYYAYYRPADSA
AEYLKATVDGGMSRSFKIDLLRPGTPYEFKLQSFNSDAASEFSAIRQART
RKTHEQPASSSATPVPANKAVEQHQNSLYPLIAGAAGGGILLLIASLVVC
LCLKRRENSQPEDENKPQLEHIQADFVTSAVLGVGGHHKSGDVRRLNGVI
PRMNITPNPLAQETASDKNNSGLHQNGLHHAQPYHPPGTPTLMHKRLDYH
QQPPPVPPHSAYYQQAPTHQPSPMMERSVRGHQQPGGFHMEEGTPTPTRI
PSLRRQRRTSGNQQVHNSHSNLNIGLSHHNNNNNNLPPHHQHLHHHPGHP
GGLVGIPIVPGSPRVQRSPMPSRAMIKRTRLGSHTDNISSGSLNSIEV*
BS25362.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:15:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| boi-PF | 998 | CG32796-PF | 1..998 | 1..998 | 5281 | 100 | Plus |
| boi-PE | 998 | CG32796-PE | 1..998 | 1..998 | 5281 | 100 | Plus |
| boi-PB | 998 | CG32796-PB | 1..998 | 1..998 | 5281 | 100 | Plus |
| boi-PG | 1105 | CG32796-PG | 1..821 | 1..821 | 4277 | 99.8 | Plus |
| boi-PA | 547 | CG32796-PA | 15..547 | 466..998 | 2850 | 99.8 | Plus |
| boi-PG | 1105 | CG32796-PG | 908..1105 | 801..998 | 1022 | 92.4 | Plus |
