BS25367.complete Sequence
812 bp assembled on 2011-07-25
GenBank Submission: KX802303
> BS25367.complete
GAAGTTATCAGTCGACATGCAGAGCGACTTTCACAGAATGAAGAACTTTG
CCAATCCCAAGTCCATGTTCAAAACCAGCGCCCCCAGCACCGAGCAGGGT
CGTCCGGAACCACCAACTTCGGCTGCAGCGCCCGCCGAGGCTAAGGATGT
CAAGCCCAAGGAGGACCCACAGGAGACTGGTGAACCAGCAGGCAACACTG
CAACCACTACTGCTCCTGCCGGCGACGATGCTGTGCGCACCGAGCATTTA
TACAAACACCCGCTCATGAATGTCTGGACGCTGTGGTACCTTGAAAACGA
TCGGTCCAAGTCCTGGGAGGACATGCAAAACGAGATCACCAGCTTCGATA
CCGTCGAGGACTTCTGGAGCCTATACAACCACATCAAGCCCCCATCAGAG
ATCAAGCTGGGTAGTGACTACTCGCTATTCAAGAAGAACATTCGTCCCAT
GTGGGAGGATGCAGCCAACAAACAGGGCGGTCGTTGGGTAATTACCCTTA
ACAAAAGCTCCAAGACCGATCTGGATAACCTATGGCTCGATGTGCTGCTC
TGCCTGATTGGTGAGGCCTTCGATCACTCCGATCAGATCTGCGGCGCTGT
TATAAACATTCGCGGCAAGAGCAACAAGATATCCATCTGGACTGCCGACG
GAAACAACGAGGAAGCTGCCCTTGAGATTGGTCACAAGCTGCGCGATGCC
TTGCGTCTGGGACGCAACAACTCGCTGCAGTATCAGTTGCACAAGGACAC
GATGGTCAAGCAGGGCTCCAACGTGAAATCGATCTACACTTTGTAGAAGC
TTTCTAGACCAT
BS25367.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:10:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF-4E-RI | 780 | CG4035-PI | 1..780 | 17..796 | 3855 | 99.6 | Plus |
| eIF-4E-RH | 780 | CG4035-PH | 1..780 | 17..796 | 3855 | 99.6 | Plus |
| eIF-4E-RD | 780 | CG4035-PD | 1..780 | 17..796 | 3855 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:10:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF-4E-RI | 1793 | CG4035-RI | 760..1541 | 15..796 | 3865 | 99.6 | Plus |
| eIF-4E-RH | 1492 | CG4035-RH | 459..1240 | 15..796 | 3865 | 99.6 | Plus |
| eIF-4E-RD | 1723 | CG4035-RD | 690..1471 | 15..796 | 3865 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:10:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9400583..9400953 | 444..74 | 1855 | 100 | Minus |
| 3L | 28110227 | 3L | 9399870..9400033 | 796..633 | 805 | 99.4 | Minus |
| 3L | 28110227 | 3L | 9400419..9400519 | 544..444 | 490 | 99 | Minus |
| 3L | 28110227 | 3L | 9400097..9400185 | 632..544 | 430 | 98.9 | Minus |
| X | 23542271 | X | 1158961..1159338 | 651..274 | 375 | 73.3 | Minus |
| 3R | 32079331 | 3R | 29026520..29026848 | 642..314 | 355 | 73.9 | Minus |
| 3L | 28110227 | 3L | 9401040..9401098 | 73..15 | 295 | 100 | Minus |
| 3L | 28110227 | 3L | 6665168..6665336 | 443..275 | 290 | 78.1 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:10:38 has no hits.
BS25367.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-25 14:58:08 Download gff for
BS25367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-4E-RE | 489..1268 | 17..796 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:49:21 Download gff for
BS25367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-4E-RD | 692..1471 | 17..796 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:53:23 Download gff for
BS25367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-4E-RD | 692..1471 | 17..796 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:53:23 Download gff for
BS25367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9400583..9400953 | 74..444 | 100 | <- | Minus |
| 3L | 9401040..9401096 | 17..73 | 100 | | Minus |
| 3L | 9399870..9400033 | 633..796 | 99 | <- | Minus |
| 3L | 9400097..9400184 | 545..632 | 98 | <- | Minus |
| 3L | 9400419..9400518 | 445..544 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:49:21 Download gff for
BS25367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9392970..9393133 | 633..796 | 99 | <- | Minus |
| arm_3L | 9393197..9393284 | 545..632 | 98 | <- | Minus |
| arm_3L | 9393519..9393618 | 445..544 | 99 | <- | Minus |
| arm_3L | 9393683..9394053 | 74..444 | 100 | <- | Minus |
| arm_3L | 9394140..9394196 | 17..73 | 100 | | Minus |
BS25367.pep Sequence
Translation from 16 to 795
> BS25367.pep
MQSDFHRMKNFANPKSMFKTSAPSTEQGRPEPPTSAAAPAEAKDVKPKED
PQETGEPAGNTATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLENDRSKSW
EDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLFKKNIRPMWEDAA
NKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINIRG
KSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQG
SNVKSIYTL*
BS25367.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:04:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF-4E-PI | 259 | CG4035-PI | 1..259 | 1..259 | 1387 | 100 | Plus |
| eIF-4E-PH | 259 | CG4035-PH | 1..259 | 1..259 | 1387 | 100 | Plus |
| eIF-4E-PD | 259 | CG4035-PD | 1..259 | 1..259 | 1387 | 100 | Plus |
| eIF-4E-PB | 259 | CG4035-PB | 1..259 | 1..259 | 1387 | 100 | Plus |
| eIF-4E-PF | 259 | CG4035-PF | 1..259 | 1..259 | 1387 | 100 | Plus |
