BS25368.complete Sequence
1142 bp assembled on 2011-07-25
GenBank Submission: KX800385
> BS25368.complete
GAAGTTATCAGTCGACATGGCTTTCGCCGGACTCAAAAAGCAGATCAACA
AGGCCAACCAGTATATGACGGAGAAGATGGGCGGTGCCGAGGGCACCAAA
CTGGACATGGACTTCATGGAGATGGAACGCAAGACGGACGTCACCGTGGA
GCTAGTGGAGGAGCTGCAGCTAAAGACGAAGGAGTTCCTGCAGCCGAATC
CAACGGCACGGGCCAAAATGGCAGCGGTCAAGGGCATCTCGAAGCTGTCC
GGACAGGCCAAGTCCAATACGTATCCGCAACCGGAGGGCCTGCTCGCGGA
ATGCATGCTGACTTATGGGAAGAAGCTCGGCGAGGACAACAGCGTGTTCG
CGCAGGCGCTCGTCGAATTCGGCGAAGCGCTGAAACAGATGGCCGACGTC
AAGTATTCGCTGGACGACAACATCAAGCAGAACTTTTTGGAGCCACTGCA
TCATATGCAGACCAAAGACCTCAAGGAGGTAATGCATCATCGCAAGAAGC
TGCAGGGCCGGCGGCTAGACTTTGACTGCAAGCGTCGCCGACAGGCCAAG
GACGATGAGATTCGTGGTGCCGAGGACAAGTTCGGTGAATCGCTCCAGCT
GGCCCAGGTGGGCATGTTCAATTTGCTCGAGAACGATACGGAGCATGTCT
CCCAGCTGGTCACCTTTGCCGAGGCACTATACGATTTTCATTCGCAATGC
GCGGATGTCCTTCGAGGCCTGCAGGAGACACTGCAGGAGAAGCGCTCCGA
GGCGGAGAGCCGGCCACGCAACGAGTTCGTGCCCAAGACGCTGCTCGATC
TGAACTTGGACGGCGGTGGCGGCGGCCTCAACGAAGATGGCACGCCGTCT
CACATTAGTTCGAGCGCCTCGCCGTTGCCCTCGCCGATGCGTTCGCCCGC
CAAGTCGATGGCCGTAACGCCGCAGCGCCAGCAGCAGCCCTGCTGCCAGG
CCCTCTACGACTTCGAGCCGGAGAATCCCGGCGAACTGGCCTTCAAGGAG
AACGACATTATCACCCTGTTGAATCGCGTCGACGACAATTGGTTCGAGGG
CGCGGTGAATGGCCGCACCGGTTACTTCCCGCAGTCGTATGTTCAGGTGC
AGGTGCCCCTGCCCAATGGCAACTAGAAGCTTTCTAGACCAT
BS25368.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:10:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| EndoA-RC | 1110 | CG14296-PC | 1..1110 | 17..1126 | 5550 | 100 | Plus |
| EndoA-RB | 1110 | CG14296-PB | 1..1110 | 17..1126 | 5550 | 100 | Plus |
| EndoA-RA | 1110 | CG14296-PA | 1..1110 | 17..1126 | 5550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:10:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| EndoA-RC | 3913 | CG14296-RC | 479..1589 | 16..1126 | 5555 | 100 | Plus |
| EndoA-RB | 3740 | CG14296-RB | 658..1768 | 16..1126 | 5555 | 100 | Plus |
| EndoA-RA | 3561 | CG14296-RA | 479..1589 | 16..1126 | 5555 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:10:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18907266..18908376 | 16..1126 | 5555 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:10:41 has no hits.
BS25368.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-25 14:58:09 Download gff for
BS25368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| endoA-RB | 658..1767 | 17..1126 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:49:23 Download gff for
BS25368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| endoA-RA | 480..1589 | 17..1126 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:53:25 Download gff for
BS25368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| EndoA-RA | 480..1589 | 17..1126 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:53:25 Download gff for
BS25368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18907267..18908376 | 17..1126 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:49:23 Download gff for
BS25368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14732989..14734098 | 17..1126 | 100 | | Plus |
BS25368.pep Sequence
Translation from 16 to 1125
> BS25368.pep
MAFAGLKKQINKANQYMTEKMGGAEGTKLDMDFMEMERKTDVTVELVEEL
QLKTKEFLQPNPTARAKMAAVKGISKLSGQAKSNTYPQPEGLLAECMLTY
GKKLGEDNSVFAQALVEFGEALKQMADVKYSLDDNIKQNFLEPLHHMQTK
DLKEVMHHRKKLQGRRLDFDCKRRRQAKDDEIRGAEDKFGESLQLAQVGM
FNLLENDTEHVSQLVTFAEALYDFHSQCADVLRGLQETLQEKRSEAESRP
RNEFVPKTLLDLNLDGGGGGLNEDGTPSHISSSASPLPSPMRSPAKSMAV
TPQRQQQPCCQALYDFEPENPGELAFKENDIITLLNRVDDNWFEGAVNGR
TGYFPQSYVQVQVPLPNGN*
BS25368.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:04:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| EndoA-PC | 369 | CG14296-PC | 1..369 | 1..369 | 1919 | 100 | Plus |
| EndoA-PB | 369 | CG14296-PB | 1..369 | 1..369 | 1919 | 100 | Plus |
| EndoA-PA | 369 | CG14296-PA | 1..369 | 1..369 | 1919 | 100 | Plus |
| EndoB-PB | 378 | CG9834-PB | 21..369 | 10..361 | 234 | 23.6 | Plus |
| EndoB-PA | 390 | CG9834-PA | 21..381 | 10..361 | 222 | 23.4 | Plus |
