Clone BS25375 Report

Search the DGRC for BS25375

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:253
Well:75
Vector:pDNR-Dual
Associated Gene/TranscriptEs2-RA
Protein status:BS25375.pep: full length peptide match
Sequenced Size:1538

Clone Sequence Records

BS25375.complete Sequence

1538 bp assembled on 2011-07-25

GenBank Submission: KX802028

> BS25375.complete
GAAGTTATCAGTCGACATGAGCGCCACGACTAGAACACCTGCCACACCGG
GGACACCTGGCACTCCCGGCAGCCTGGCCATGGAAGTGGCCCGCGTCCAG
AATTCAGCACTCGCCGAGTTTAAAAAGCCCACGGCGATGGTGCGCCACAA
GAACAAGCCAAAGATCCTTACCGAGGAGAAGTACATCGAGGAGATGTCTA
AGATCATCCAGCGCGACTTCTTTCCCGATCTGGAGCGGCTGCGTGCCCAA
AACGACTACCTGGACGCGGAGTCACGGCGCGACTTTGTACAAATGGCCGA
GATTCGGGAGCGCTACAGTCTGGGCAGGATTTCCGGGACAGGAAGAAGCA
CCAGCCGACGGAATAATGCCATGTCCCCGGCCACATTTGAGACACCAGTG
AGTCAGGCGAAATGTAGCAACACCCCATTGCCAAATTCCCGGGCCACAGA
CACACCATTTTCCACGGACGGCTCCGAGAAGAGCGATGCCGAGGGCAGGG
ACACCACCGCGAAGCTATCGCTGGACGCCTTTCTGCAGAAGTACACCAGC
GAGGATAACCAGAGCTTTCAGGAGATCATCGAAACGGCCGAGGCCAAGCT
GCGCCAAAAATACGCAGTACTGTACAACCATGAGAAGCTCTCCGCAGAGC
AACTGCAGCGGGCCCTAATGCTGCCCAGCATAGAAACGCAATTCGAGGAG
CCAGATCCGCTGAGAAAGATCGAAACCTGGAACTACACCAACATGAATTC
CATTATGTACGTGCCCGATGGCGTGGAGTACACAGAGGAGGAGCGCGTCC
AGTTGGCCGAACGGAAGCAGAGCATCCAACACAATGCCACCAGGCTGCCC
GATGAGGCAAAGCATCGCGAAATGGACACTAAAAAGCTGAATGATGAAGT
GCCCCAAAATGGGGCTGGTGGTGCCACAGCTACTCCGAAGGTACGCGGCT
TCGATTTGTTGCGTTCACCATCACCGCGACCCGGAGAGGCTTTCTCGCCC
ATAATGACCTGGGGTGAGATCGATGGCACTCCCTTTCGCCTGGACGGAGG
CGATACCCCATTGCGGCCCACACAAGGACCCTCGTTCCGGATTAATGAGA
ACTCTCGGCGCGAAAACATCGCCATCGCTTTGGCCGAAAGGGTCAGCGAA
AGGATGCGAAATCAAAAACAAATGGCTCTGGATACGGCGCGTCGTAACAT
TGGCTCACCACTGATACGCACCAATATGGAACGGCTGGCCAGCATGTCGC
CGGCAGCGCAGCTACTGGCCACGGGTAAGCTGGGTATCCGCGGCACGCCC
CGATTAAGGCACACACCATCGCCGATGAGCGGCAGAAAACGAAAGGTTAC
GCCCGGCGTGGTGAGGAGCACCAATACGCCAATACTGGGTGAACCCAAAC
CCAAACAGCAGGCCAAGATTAGCACTCCGGCTAAGAACGTTACCATTGAT
ACGGGATCCACGCTCACGGACGATCTGCTCAAGATACCCACTAAACGACG
CACTGCAGCCGATTTCTTTTAGAAGCTTTCTAGACCAT

BS25375.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:11:06
Subject Length Description Subject Range Query Range Score Percent Strand
Es2-RA 1506 CG1474-PA 1..1506 17..1522 7530 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:11:07
Subject Length Description Subject Range Query Range Score Percent Strand
Es2-RA 1729 CG1474-RA 93..1598 17..1522 7530 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:11:04
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8462064..8463218 368..1522 5775 100 Plus
X 23542271 X 8461571..8461922 17..368 1760 100 Plus
Blast to na_te.dros performed on 2014-11-26 22:11:05 has no hits.

BS25375.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-25 14:58:11 Download gff for BS25375.complete
Subject Subject Range Query Range Percent Splice Strand
Es2-RA 96..1601 17..1522 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:49:36 Download gff for BS25375.complete
Subject Subject Range Query Range Percent Splice Strand
Es2-RA 93..1598 17..1522 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:53:37 Download gff for BS25375.complete
Subject Subject Range Query Range Percent Splice Strand
Es2-RA 93..1598 17..1522 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:53:37 Download gff for BS25375.complete
Subject Subject Range Query Range Percent Splice Strand
X 8461571..8461922 17..368 100 -> Plus
X 8462065..8463218 369..1522 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:49:36 Download gff for BS25375.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8355604..8355955 17..368 100 -> Plus
arm_X 8356098..8357251 369..1522 100   Plus

BS25375.pep Sequence

Translation from 16 to 1521

> BS25375.pep
MSATTRTPATPGTPGTPGSLAMEVARVQNSALAEFKKPTAMVRHKNKPKI
LTEEKYIEEMSKIIQRDFFPDLERLRAQNDYLDAESRRDFVQMAEIRERY
SLGRISGTGRSTSRRNNAMSPATFETPVSQAKCSNTPLPNSRATDTPFST
DGSEKSDAEGRDTTAKLSLDAFLQKYTSEDNQSFQEIIETAEAKLRQKYA
VLYNHEKLSAEQLQRALMLPSIETQFEEPDPLRKIETWNYTNMNSIMYVP
DGVEYTEEERVQLAERKQSIQHNATRLPDEAKHREMDTKKLNDEVPQNGA
GGATATPKVRGFDLLRSPSPRPGEAFSPIMTWGEIDGTPFRLDGGDTPLR
PTQGPSFRINENSRRENIAIALAERVSERMRNQKQMALDTARRNIGSPLI
RTNMERLASMSPAAQLLATGKLGIRGTPRLRHTPSPMSGRKRKVTPGVVR
STNTPILGEPKPKQQAKISTPAKNVTIDTGSTLTDDLLKIPTKRRTAADF
F*

BS25375.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:05:05
Subject Length Description Subject Range Query Range Score Percent Strand
Es2-PA 501 CG1474-PA 1..501 1..501 2564 100 Plus