BS25390.complete Sequence
461 bp assembled on 2011-07-25
GenBank Submission: KX803358
> BS25390.complete
GAAGTTATCAGTCGACATGCTGGATATCGCTGCACAACTCCTTGCCGTGG
GCCTCTTGTGGGGCGTTACCAATCCGTTTATTCGCCTCGGCAGCCAGGGA
ATCGAGTCGGTTGGTGATACGGGCTCAAAGTGGCGTAACTTTGTCCAGGA
GGCACGCACAATCGGCTCCCGGTGGCGCTATTGGATACCCTTCGGTCTCA
ACCAGTGCGGGAGTGCTCTGTACGTTTGGACGCTCCAGAGGGCCAGTATT
ACAGTGGCGGTGCCAGTGGCCAATTCCCTGAGCTTCGCATTTACGGCAAT
CACCGGATATGCGCTGGGGGAAAAACTGCCGGGAAGAAAAGTCATTCTGG
GCACCCTGCTCGTCTGCTGTGGCAGTATCCTGATGATATACGATAAGATT
TTGCAGGAACAGGCCCAGCACCAGCTAAATATAACATTCCACTGAAAGCT
TTCTAGACCAT
BS25390.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:13:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12929-RA | 429 | CG12929-PA | 1..429 | 17..445 | 2145 | 100 | Plus |
| CG12929-RB | 339 | CG12929-PB | 1..322 | 17..338 | 1610 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:13:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12929-RA | 493 | CG12929-RA | 50..478 | 17..445 | 2145 | 100 | Plus |
| CG12929-RB | 551 | CG12929-RB | 50..371 | 17..338 | 1610 | 100 | Plus |
| CG12929-RB | 551 | CG12929-RB | 430..536 | 339..445 | 535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:13:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9586290..9586596 | 338..32 | 1535 | 100 | Minus |
| 2R | 25286936 | 2R | 9586125..9586231 | 445..339 | 535 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:13:09 has no hits.
BS25390.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-25 14:58:16 Download gff for
BS25390.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12929-RA | 11..438 | 17..444 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:50:47 Download gff for
BS25390.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12929-RA | 50..477 | 17..444 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:54:35 Download gff for
BS25390.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12929-RA | 50..477 | 17..444 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:54:35 Download gff for
BS25390.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9586126..9586231 | 339..444 | 100 | <- | Minus |
| 2R | 9586290..9586595 | 33..338 | 100 | <- | Minus |
| 2R | 9586650..9586665 | 17..32 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:50:47 Download gff for
BS25390.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5473631..5473736 | 339..444 | 100 | <- | Minus |
| arm_2R | 5473795..5474100 | 33..338 | 100 | <- | Minus |
| arm_2R | 5474155..5474170 | 17..32 | 100 | | Minus |
BS25390.pep Sequence
Translation from 16 to 444
> BS25390.pep
MLDIAAQLLAVGLLWGVTNPFIRLGSQGIESVGDTGSKWRNFVQEARTIG
SRWRYWIPFGLNQCGSALYVWTLQRASITVAVPVANSLSFAFTAITGYAL
GEKLPGRKVILGTLLVCCGSILMIYDKILQEQAQHQLNITFH*
BS25390.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:05:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12929-PA | 142 | CG12929-PA | 1..142 | 1..142 | 741 | 100 | Plus |
| CG12929-PB | 112 | CG12929-PB | 1..107 | 1..107 | 560 | 100 | Plus |
