BS25393.complete Sequence
536 bp assembled on 2011-07-25
GenBank Submission: KX803230
> BS25393.complete
GAAGTTATCAGTCGACATGCGTACTTTGTGTGCTCTAAGTTTGATCGCTT
TTATGGGCATAACCCTAATATCTACAAAGCCATTAGATGAATCTATCAAA
CCGAAAGTTTTAAGGCCACTAAATCAAGCGGATTTGGATAAAATGATAAA
AAACTTGCAGTTGCTTGAAAAATTAGCCAATGAGACATATTATTCACCAG
ATCCCACCAAAAAGGAGACATACTTAACGCAAGATCAAAAGGCGGAGGAA
ACTAAAGAGCCAACTGGAGAGGAAACCGAGGAACCTTCTGGAGAGGAAAC
TCACAGTCCTACGGGAGAGGAAACCAAAAGTCAAACTGGAGAAGATGGCG
AGTTCTTCGAAGATGAAGAGGAGGAAGATGAAGCGACTGTGGATAAACCA
ACTGATGTCATACCAGTTAATTTTCTAAAATATCCCGAGCACGAAGCTGA
TTTTAAGTCTTATCCAAGGTTTGCAATCCTTCGAAATGGCTATGTGCATC
ACATGAACTTGGACTTTTAGAAGCTTTCTAGACCAT
BS25393.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:13:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18581-RA | 504 | CG18581-PA | 1..504 | 17..520 | 2520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:13:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18581-RA | 660 | CG18581-RA | 11..514 | 17..520 | 2520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:13:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15049696..15050199 | 520..17 | 2520 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 22:13:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Helena | 1317 | Helena HEL 1317bp | 38..76 | 68..30 | 105 | 74.4 | Minus |
BS25393.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-25 14:58:18 Download gff for
BS25393.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18581-RA | 11..514 | 17..520 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:51:07 Download gff for
BS25393.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18581-RA | 11..514 | 17..520 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:54:53 Download gff for
BS25393.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18581-RA | 11..514 | 17..520 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:54:53 Download gff for
BS25393.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15049696..15050199 | 17..520 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:51:07 Download gff for
BS25393.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15042796..15043299 | 17..520 | 100 | | Minus |
BS25393.pep Sequence
Translation from 16 to 519
> BS25393.pep
MRTLCALSLIAFMGITLISTKPLDESIKPKVLRPLNQADLDKMIKNLQLL
EKLANETYYSPDPTKKETYLTQDQKAEETKEPTGEETEEPSGEETHSPTG
EETKSQTGEDGEFFEDEEEEDEATVDKPTDVIPVNFLKYPEHEADFKSYP
RFAILRNGYVHHMNLDF*
BS25393.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:05:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18581-PA | 167 | CG18581-PA | 1..167 | 1..167 | 875 | 100 | Plus |