BS25447.complete Sequence
998 bp assembled on 2011-07-25
GenBank Submission: KX803055
> BS25447.complete
GAAGTTATCAGTCGACATGCACCAGGAGCACATGGACCTGCATGAGCCCG
TGGACTTGAACAAGTCCCTGGACGAAATGACGCCGGAGGAGCGAATGCGA
GCGCAGCATCAACTGATGGTGGAGAAACATCGCGGCCACGATGCCATGCA
CTCCGAGATGGTGATCATTCTGTTCGTCACCCTGGTTATTGCCCAGATCA
TCCTGGTCGAGTGGAAGAAGCGGCACTACAGATCCTACGCTTTCGTCACC
CTGCTGGCCATGTGGCTCATTCCGCTGATCATCTCCTGCAGCTTCGGCTG
GCTGCGCTTCATAATCATCTGGCTGGTGTTCACCTGCATCACGGCACTGG
TTATGCGACGGGCCATCAGCAAGCCCATCCAGGGCACAACGCCTAGGCTG
GTCTACAAGTGGTTCTACTTCATCTACAAGCTCAGCTATGGCCTTGGCCT
GGTGGGCTATCTGGTGATCATAGCCGCCTTTCTGGGCATGAATTACATGT
TCTCACAGCCACCAAACACATGGATGGATGTGGGCCTGATGTTCTGCTTC
TACGGCCTGTACATCGGCGTCCTGGGGCGTGATATATCCGAGATATGTTC
GGATAAGATGGCGGCAGCTATTGGCTACTACACACCTCAGGGTATTCCAA
CACGACATCTTGATCAGAATGTCTGCGCAGTGTGTGGCAATCAGTTGCTG
GTCTCGGAGAAGGAAGAGGGCGTCATTGAGAACACCTACAAGTTGTCTTG
TAACCACGTATTCCACGAGTTCTGTATACGTGGTTGGTGCATTGTGGGCA
AGAAGCAGACGTGTCCCTACTGCAAGGAAAAGGTCGATCTCCAGAAGATG
TTCCGCAATCCCTGGGAGAAGCCGCACGTTTTGTACGGTCGCCTGCTGGA
TTGGATTCGTTGGCTGGTGGCCTGGCAGCCGCTCATCTTTTTCATAGTAC
AAGGCATCAACTGGATGCTGGGACTGGAGTAGAAGCTTTCTAGACCAT
BS25447.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:16:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15814-RC | 966 | CG15814-PC | 1..966 | 17..982 | 4830 | 100 | Plus |
CG15814-RA | 966 | CG15814-PA | 1..966 | 17..982 | 4830 | 100 | Plus |
CG15814-RB | 966 | CG15814-PB | 1..966 | 17..982 | 4830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:16:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15814-RC | 1740 | CG15814-RC | 244..1210 | 17..983 | 4835 | 100 | Plus |
CG15814-RA | 1884 | CG15814-RA | 388..1354 | 17..983 | 4835 | 100 | Plus |
CG15814-RB | 1664 | CG15814-RB | 168..1134 | 17..983 | 4835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:16:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17849413..17849711 | 397..99 | 1495 | 100 | Minus |
X | 23542271 | X | 17848819..17849054 | 861..626 | 1180 | 100 | Minus |
X | 23542271 | X | 17849117..17849347 | 625..395 | 1155 | 100 | Minus |
X | 23542271 | X | 17848640..17848761 | 983..862 | 610 | 100 | Minus |
X | 23542271 | X | 17849908..17849955 | 64..17 | 240 | 100 | Minus |
X | 23542271 | X | 17849776..17849812 | 99..63 | 185 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 22:16:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osvaldo | 1543 | Osvaldo OSV 1543bp | 263..299 | 291..255 | 113 | 78.4 | Minus |
BS25447.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-25 14:58:24 Download gff for
BS25447.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15814-RC | 179..1144 | 17..982 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:52:42 Download gff for
BS25447.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15814-RB | 168..1133 | 17..982 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:56:14 Download gff for
BS25447.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15814-RB | 168..1133 | 17..982 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:56:14 Download gff for
BS25447.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17849117..17849345 | 397..625 | 100 | <- | Minus |
X | 17849414..17849710 | 100..396 | 100 | <- | Minus |
X | 17849776..17849810 | 65..99 | 100 | <- | Minus |
X | 17849908..17849955 | 17..64 | 100 | | Minus |
X | 17848641..17848761 | 862..982 | 100 | <- | Minus |
X | 17848819..17849054 | 626..861 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:52:42 Download gff for
BS25447.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17743150..17743378 | 397..625 | 100 | <- | Minus |
arm_X | 17743447..17743743 | 100..396 | 100 | <- | Minus |
arm_X | 17743809..17743843 | 65..99 | 100 | <- | Minus |
arm_X | 17743941..17743988 | 17..64 | 100 | | Minus |
arm_X | 17742674..17742794 | 862..982 | 100 | <- | Minus |
arm_X | 17742852..17743087 | 626..861 | 100 | <- | Minus |
BS25447.pep Sequence
Translation from 16 to 981
> BS25447.pep
MHQEHMDLHEPVDLNKSLDEMTPEERMRAQHQLMVEKHRGHDAMHSEMVI
ILFVTLVIAQIILVEWKKRHYRSYAFVTLLAMWLIPLIISCSFGWLRFII
IWLVFTCITALVMRRAISKPIQGTTPRLVYKWFYFIYKLSYGLGLVGYLV
IIAAFLGMNYMFSQPPNTWMDVGLMFCFYGLYIGVLGRDISEICSDKMAA
AIGYYTPQGIPTRHLDQNVCAVCGNQLLVSEKEEGVIENTYKLSCNHVFH
EFCIRGWCIVGKKQTCPYCKEKVDLQKMFRNPWEKPHVLYGRLLDWIRWL
VAWQPLIFFIVQGINWMLGLE*
BS25447.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:06:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15814-PC | 321 | CG15814-PC | 1..321 | 1..321 | 1754 | 100 | Plus |
CG15814-PA | 321 | CG15814-PA | 1..321 | 1..321 | 1754 | 100 | Plus |
CG15814-PB | 321 | CG15814-PB | 1..321 | 1..321 | 1754 | 100 | Plus |
CG15814-PD | 301 | CG15814-PD | 1..301 | 21..321 | 1644 | 100 | Plus |