Clone BS25448 Report

Search the DGRC for BS25448

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:254
Well:48
Vector:pDNR-Dual
Associated Gene/TranscriptAdSL-RA
Protein status:BS25448.pep: full length peptide match
Sequenced Size:1478

Clone Sequence Records

BS25448.complete Sequence

1478 bp assembled on 2011-07-25

GenBank Submission: KX806129

> BS25448.complete
GAAGTTATCAGTCGACATGGCTAGCAACTACGAGGGCTACAAGTCGCCGC
TGAGCACCCGGTACGCCAGCAAAGAGATGCAGTTCCTCTTCAGTGACCAG
AACAAGTTCTCCACCTGGCGCCGGTTGTGGGTGTGGCTGGCGAAGGCGGA
GAGCAGGCTGGGACTAGAGATCAGCGATGCCCAGATTGCCGAGATGGAGC
TCCAGATCAGCAACATCGACTTTGAGGCGGCCGCCGCCGAGGAGCGACTT
ACGCGCCACGACGTAATGGCCCACGTCCATGTCTTTGCCAAACAGTGTCC
CTCTGCTGCGCCGGTGATCCATTTGGGAGCAACCTCGTGCTATGTGGGCG
ACAACACTGATCTGATTGTACTGAGGGACGCTCTTAAACTGCTCCTTCCA
CGAGTCGCCAGCGTGATAGCTCGTCTAAGCCAGTTTGCCCAGAGCTACAA
GGATCAGCCCACGTTGGGATTCACCCATCTCCAGCCTGCGCAGTTGACCA
CGGTTGGCAAGCGGGCGTGCCTGTGGATCCAGGATCTGATCATGGACGAA
CGCGCGCTGTCCCGCTGTTTAGAGGACCTGCGCTTCCGTGGAGTCAAGGG
AACTACTGGTACCCAGGCCTCGTTCCTGCAACTTTTCAATGGGGATGGCG
AGAAGGTGAAGCAGCTGGATCAGTTGGTCACCGAACTGGCTGGCTTCAAG
AAGGCCTATGCGGTAACCGGTCAAACATACTCCCGAAAGGTGGATGTGGA
GATCGTGGCCGCGCTTGCCAGTCTCGGCACCACCATCCACAAGATGTGCT
CCGATCTGCGCATCCTCGCTTCTCGCAAAGAGCTGGAGGAGCCCTTCGAG
AGCACTCAGATTGGCTCCTCGGCCATGCCGTACAAGAGGAACCCTATGCG
CTCGGAGCGTTGTTGCGCCCTGGCCCGTCACCTCATCACCTTGTTCAGCA
GTGCTGCTAATACACATGCCACTCAGTGGCTGGAACGCACTCTGGATGAC
TCTGCCAACAGGAGGTTGACCCTATCCGAGGCCTTCCTGGCTGCAGATGC
CGCCCTGCTTACTCTGCTGAACATCTCGCAGGGACTGGTCGTTTACCCAA
AGGTGATTGAACGGCACATTTCCCAAGAGCTGCCGTTCATGTCCACAGAG
AACATAATCATGGCCATGGTGAAGGCGGGAGGAGATCGCCAGGTGTGCCA
CGAGAAGATTCGCGTGCTGTCCCAGGAGGCCGGAGCCCAGGTGAAGCAGC
ATGGCAAGGACAACGACCTCGTGGTTCGAGTGCGAAAGGATCCCTACTTT
TCGCCCATCCTGGAGCAACTGGACACCATACTGGATGCCAAAACCTTTAC
TGGACGTGCCAGCGACCAAGTGGGCGAGTTCGTCAAGGAGGAAGTGGAAC
CCGTGCTGGCACGCTACTCCGAAGCCCTGAAGAACGTTCAAGACGTCAAA
CTGAACATCTAGAAGCTTTCTAGACCAT

BS25448.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:16:59
Subject Length Description Subject Range Query Range Score Percent Strand
AdSL-RA 1446 CG3590-PA 1..1446 17..1462 7230 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:17:00
Subject Length Description Subject Range Query Range Score Percent Strand
AdSL-RA 2341 CG3590-RA 127..1573 17..1463 7235 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:16:58
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17019548..17020994 1463..17 7235 100 Minus
Blast to na_te.dros performed on 2014-11-26 22:16:59 has no hits.

BS25448.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-25 14:58:25 Download gff for BS25448.complete
Subject Subject Range Query Range Percent Splice Strand
CG3590-RA 95..1540 17..1462 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:52:56 Download gff for BS25448.complete
Subject Subject Range Query Range Percent Splice Strand
CG3590-RA 127..1572 17..1462 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:56:26 Download gff for BS25448.complete
Subject Subject Range Query Range Percent Splice Strand
AdSL-RA 127..1572 17..1462 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:56:26 Download gff for BS25448.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17019549..17020994 17..1462 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:52:56 Download gff for BS25448.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12845271..12846716 17..1462 100   Minus

BS25448.pep Sequence

Translation from 16 to 1461

> BS25448.pep
MASNYEGYKSPLSTRYASKEMQFLFSDQNKFSTWRRLWVWLAKAESRLGL
EISDAQIAEMELQISNIDFEAAAAEERLTRHDVMAHVHVFAKQCPSAAPV
IHLGATSCYVGDNTDLIVLRDALKLLLPRVASVIARLSQFAQSYKDQPTL
GFTHLQPAQLTTVGKRACLWIQDLIMDERALSRCLEDLRFRGVKGTTGTQ
ASFLQLFNGDGEKVKQLDQLVTELAGFKKAYAVTGQTYSRKVDVEIVAAL
ASLGTTIHKMCSDLRILASRKELEEPFESTQIGSSAMPYKRNPMRSERCC
ALARHLITLFSSAANTHATQWLERTLDDSANRRLTLSEAFLAADAALLTL
LNISQGLVVYPKVIERHISQELPFMSTENIIMAMVKAGGDRQVCHEKIRV
LSQEAGAQVKQHGKDNDLVVRVRKDPYFSPILEQLDTILDAKTFTGRASD
QVGEFVKEEVEPVLARYSEALKNVQDVKLNI*

BS25448.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:06:17
Subject Length Description Subject Range Query Range Score Percent Strand
AdSL-PA 481 CG3590-PA 1..481 1..481 2432 100 Plus