BS25480.complete Sequence
803 bp assembled on 2011-07-25
GenBank Submission: KX802647
> BS25480.complete
GAAGTTATCAGTCGACATGGAATCGAGGGACCGGAAAACTTCGAATGAGG
ACGACTCGTCGGAAATCTCCGAATTGGATGTGGGCAGTGATAGGTTTAAT
CCTCTGCGAGCGTTATACGAACCCAATTTTAGGGTGACCGATGCTGTTCC
AAAGGTCATCTACCAGAATCTGGCTGCCTTCGAGAGTGCACTTAAAAAAT
TCGGCATCTGGCAGCTGAACAAGCGCCAAAAGCCGGGATCCGCAGAAGGA
GGAGATCAGGGGACATCGAAAAAGGCTTCCACTTCCGAGGCTGTAGATAT
TCTACCTCCTGAGCGACGTTTTGAGCCGCACCAGATGCCTACCACTAGTA
GCAGAAAGAAGCATCATCGAAATATTTTCACCTACATGGAGGCAGCTGTC
GGTCCATTGGAACTCCTAACGAAGTGCATATCCCCTGCTAGCCACAATGA
ATCCAACGAAAGGAGAAGAGTTCGGGTGGTGATTCGCAAACACGGATCGG
TGGGCGGCAGTGTCGAGGGTGAACTGTTGGCCTTTGACAAGCAGTGGAAC
CTCCTACTGAGGAATGTTACCGAAACCTGGAAGCGACGAAAGTACAATTA
CGGAGAGCAAAACATATGCGACACACCTGTTGATTGCACAGGCCGCCTCA
AGGAGTTGGGTATCACTCTTCCCAGGACTGTAGTCAAAAATCTAAACCGA
AAAAACGTGGAGATTCGGCGAGAGCTCCCACAGATTTTAATACGCGGCGA
GAATGTGGTTCTAGTTAGTTTAATACCAACAAAATAGAAGCTTTCTAGAC
CAT
BS25480.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:18:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Lsm11-RA | 771 | CG12924-PA | 1..771 | 17..787 | 3840 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:18:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Lsm11-RA | 1067 | CG12924-RA | 87..858 | 16..787 | 3845 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:18:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9838643..9839414 | 787..16 | 3845 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:18:09 has no hits.
BS25480.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-25 14:58:29 Download gff for
BS25480.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lsm11-RA | 88..851 | 17..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:53:34 Download gff for
BS25480.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lsm11-RA | 88..851 | 17..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:57:03 Download gff for
BS25480.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lsm11-RA | 88..851 | 17..780 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:57:03 Download gff for
BS25480.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9838650..9839413 | 17..780 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:53:34 Download gff for
BS25480.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5726155..5726918 | 17..780 | 99 | | Minus |
BS25480.pep Sequence
Translation from 16 to 786
> BS25480.pep
MESRDRKTSNEDDSSEISELDVGSDRFNPLRALYEPNFRVTDAVPKVIYQ
NLAAFESALKKFGIWQLNKRQKPGSAEGGDQGTSKKASTSEAVDILPPER
RFEPHQMPTTSSRKKHHRNIFTYMEAAVGPLELLTKCISPASHNESNERR
RVRVVIRKHGSVGGSVEGELLAFDKQWNLLLRNVTETWKRRKYNYGEQNI
CDTPVDCTGRLKELGITLPRTVVKNLNRKNVEIRRELPQILIRGENVVLV
SLIPTK*
BS25480.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:06:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Lsm11-PA | 256 | CG12924-PA | 1..256 | 1..256 | 1326 | 100 | Plus |