BS25481.complete Sequence
1535 bp assembled on 2011-07-25
GenBank Submission: KX800936
> BS25481.complete
GAAGTTATCAGTCGACATGTCTTGGACCGCTTCAGTTTTCTTGAGGACTT
CCACCACTAGCATGAAGTTTCTGCGTCTGCGCTGGCCTCTCCCCAGAATT
CCCCAGAATAAATCGGCAAACGTTGCGCCGCGTTTCAGAAGCAAATCAGC
AGTCAGCCAGCTCTCATCTGGATTTAAATTTGTGCAGATCCGCAAAAGTA
CTTGTGACAGCAACGAGATGACCATCAAAGCGATCAAGGCCCGTCAGATC
TACGACTCCCGTGGCAACCCCACCGTGGAGGTCGACCTGACCACCGAGCT
GGGACTCTTCCGCGCCGCCGTGCCCTCCGGCGCCTCCACTGGCGTCCACG
AGGCCCTGGAGCTGCGCGACAACGACAAGGCCAACTACCATGGCAAGTCG
GTGCTGAAGGCCGTGGGCCATGTGAACGACACCCTGGGCCCCGAGCTGAT
CAAGGCCAATCTGGATGTGGTTGACCAGGCGTCCATTGACAACTTCATGA
TCAAGTTGGACGGCACCGAGAACAAGAGCAAGTTCGGAGCCAACGCCATC
CTGGGCGTTTCCCTGGCCGTGGCCAAGGCTGGAGCCGCCAAGAAGGGCGT
GCCGCTGTACAAACACATTGCCGATCTGGCTGGCAACAAGGAGATCATCC
TGCCGGTGCCCGCTTTCAACGTGATCAACGGCGGCAGCCACGCCGGCAAC
AAGCTGGCCATGCAGGAGTTCATGATCCTGCCCACCGGCGCCACCAGCTT
CACAGAGGCCATGAAGATGGGCTCCGAGGTGTACCACCACCTGAAGAATG
TGATCAAGGCCAAGTTCGGTCTGGACGCCACCGCCGTGGGCGATGAGGGC
GGCTTCGCCCCCAACATCCAGTCCAACAAGGAGGCTCTGAATCTGATCAG
CGATGCCATCGCCAAGGCCGGATACACCGGCAAGATCGAGATCGGCATGG
ATGTGGCCGCCTCCGAGTTCTACAAGGATGGCCAGTACGATCTGGACTTC
AAGAACGAGAAGAGCGACAAGTCGCAGTGGCTGCCCGCCGACAAGCTGGC
CAACCTGTACCAGGAGTTTATCAAGGACTTCCCCATCGTCTCGATTGAGG
ATCCCTTTGACCAGGACCACTGGGAGGCCTGGTCCAACCTGACCGGCTGC
ACCGACATCCAGATCGTGGGCGATGATCTGACCGTGACCAACCCCAAGCG
TATTGCCACCGCCGTGGAGAAGAAGGCCTGCAACTGCCTGCTCCTGAAGG
TCAACCAGATCGGCACCGTCACCGAATCCATTGCCGCCCATCTGCTGGCC
AAGAAGAACGGCTGGGGCACCATGGTCTCCCACCGTTCCGGTGAGACCGA
GGACTCGTTCATCGGTGACCTGGTCGTCGGTCTGTCCACCGGCCAGATCA
AGACCGGAGCTCCATGCCGCTCGGAGCGTCTGGCCAAGTACAACCAGATC
CTGCGCATCGAGGAGGAGATCGGCGCTGGCGTCAAGTTCGCCGGCAAGTC
GTTCAGGAAGCCGCAGTAAAAGCTTTCTAGACCAT
BS25481.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:18:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eno-RD | 1503 | CG17654-PD | 1..1503 | 17..1519 | 7395 | 99.5 | Plus |
| Eno-RC | 1503 | CG17654-PC | 1..1503 | 17..1519 | 7395 | 99.5 | Plus |
| Eno-RE | 1503 | CG17654-PE | 1..1503 | 17..1519 | 7395 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:18:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eno-RD | 2198 | CG17654-RD | 328..1831 | 16..1519 | 7400 | 99.5 | Plus |
| Eno-RC | 2257 | CG17654-RC | 387..1890 | 16..1519 | 7400 | 99.5 | Plus |
| Eno-RE | 2664 | CG17654-RE | 588..2091 | 16..1519 | 7400 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:18:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1725341..1726656 | 1519..204 | 6460 | 99.4 | Minus |
| 2L | 23513712 | 2L | 1727646..1727834 | 204..16 | 945 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:18:25 has no hits.
BS25481.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-25 14:58:30 Download gff for
BS25481.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eno-RC | 384..1884 | 17..1517 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:53:44 Download gff for
BS25481.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eno-RE | 589..2089 | 17..1517 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:57:10 Download gff for
BS25481.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eno-RE | 589..2089 | 17..1517 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:57:10 Download gff for
BS25481.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1725343..1726655 | 205..1517 | 99 | <- | Minus |
| 2L | 1727646..1727833 | 17..204 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:53:44 Download gff for
BS25481.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1725343..1726655 | 205..1517 | 99 | <- | Minus |
| arm_2L | 1727646..1727833 | 17..204 | 100 | | Minus |
BS25481.pep Sequence
Translation from 16 to 1518
> BS25481.pep
MSWTASVFLRTSTTSMKFLRLRWPLPRIPQNKSANVAPRFRSKSAVSQLS
SGFKFVQIRKSTCDSNEMTIKAIKARQIYDSRGNPTVEVDLTTELGLFRA
AVPSGASTGVHEALELRDNDKANYHGKSVLKAVGHVNDTLGPELIKANLD
VVDQASIDNFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKH
IADLAGNKEIILPVPAFNVINGGSHAGNKLAMQEFMILPTGATSFTEAMK
MGSEVYHHLKNVIKAKFGLDATAVGDEGGFAPNIQSNKEALNLISDAIAK
AGYTGKIEIGMDVAASEFYKDGQYDLDFKNEKSDKSQWLPADKLANLYQE
FIKDFPIVSIEDPFDQDHWEAWSNLTGCTDIQIVGDDLTVTNPKRIATAV
EKKACNCLLLKVNQIGTVTESIAAHLLAKKNGWGTMVSHRSGETEDSFIG
DLVVGLSTGQIKTGAPCRSERLAKYNQILRIEEEIGAGVKFAGKSFRKPQ
*
BS25481.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:06:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eno-PD | 500 | CG17654-PD | 1..500 | 1..500 | 2564 | 100 | Plus |
| Eno-PC | 500 | CG17654-PC | 1..500 | 1..500 | 2564 | 100 | Plus |
| Eno-PE | 500 | CG17654-PE | 1..500 | 1..500 | 2564 | 100 | Plus |
| Eno-PB | 500 | CG17654-PB | 1..500 | 1..500 | 2564 | 100 | Plus |
| Eno-PF | 433 | CG17654-PF | 1..433 | 68..500 | 2222 | 100 | Plus |
