BS25507.complete Sequence
1355 bp assembled on 2011-08-02
GenBank Submission: KX803908
> BS25507.complete
GAAGTTATCAGTCGACATGGAGCTGCGCGTGGGTAACAAATATCGCCTGG
GCCGCAAGATAGGATCGGGATCGTTCGGCGACATCTACCTGGGCACCACG
ATCAACACTGGCGAGGAGGTGGCCATCAAGCTGGAGTGCATCCGCACCAA
ACACCCCCAGCTGCACATCGAGTCAAAGTTCTACAAGACGATGCAGGGTG
GCATAGGCATACCCCGCATAATCTGGTGCGGCAGCGAGGGCGACTACAAT
GTGATGGTGATGGAGCTACTCGGACCCTCGCTGGAGGACCTCTTCAACTT
TTGTTCACGCCGCTTTTCGTTGAAGACGGTTCTGCTGCTGGCGGACCAGA
TGATCTCCCGCATCGATTACATACACTCGCGGGACTTCATCCATCGCGAC
ATCAAGCCGGATAACTTCCTCATGGGTCTTGGCAAAAAGGGCAACCTGGT
GTACATCATTGACTTTGGCCTGGCCAAGAAATTCCGCGATGCCCGGTCGC
TGAAGCACATTCCCTATCGGGAAAACAAGAACCTCACGGGCACTGCCCGC
TATGCCTCCATCAACACACATTTGGGCATTGAGCAATCGCGTCGTGACGA
CCTGGAGTCCCTGGGCTACGTCCTAATGTACTTCAATCTGGGCGCCTTGC
CCTGGCAGGGCTTAAAGGCAGCCAACAAGAGGCAAAAGTACGAGAGGATC
TCGGAGAAGAAGCTGTCCACCTCGATTGTGGTGCTGTGCAAGGGCTTCCC
CAGCGAGTTCGTCAACTATCTGAACTTCTGTCGCCAGATGCATTTCGACC
AGCGTCCCGATTACTGCCACCTGCGCAAACTCTTCCGCAACTTGTTCCAC
CGTTTGGGCTTCACTTACGACTATGTGTTTGACTGGAACCTGCTTAAGTT
TGGCGGACCTCGCAATCCCCAGGCGATTCAGCAGGCGCAGGACGGAGCGG
ACGGCCAGGCGGGTCATGATGCGGTGGCCGCAGCAGCGGCGGTGGCAGCA
GCGGCAGCCGCCTCCTCGCATCAACAACAGCAGCACAAGGTCAATGCGGC
GCTGGGTGGCGGAGGAGGCAGTGCAGCGCAACAGCAACTCCAGGGCGGCC
AAACGCTGGCGATGCTGGGCGGCAATGGAGGCGGTAACGGCAGCCAACTG
ATCGGCGGCAACGGACTCAACATGGACGACTCGATGGCGGCCACCAACTC
GTCGAGACCGCCGTACGACACGCCGGAGCGTCGGCCTTCGATACGGATGC
GGCAGGGAGGCGGTGGTGGCGGCGGTGGAGTGGGCGTAGGCGGTATGCCG
AGCGGCGGAGGGGGCGGTGGCGTGGGGAACGCCAAATAAAAGCTTTCTAG
ACCAT
BS25507.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:53:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dco-RD | 1323 | CG2048-PD | 1..1323 | 17..1339 | 6615 | 100 | Plus |
| dco-RC | 1323 | CG2048-PC | 1..1323 | 17..1339 | 6615 | 100 | Plus |
| dco-RB | 1323 | CG2048-PB | 1..1323 | 17..1339 | 6615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dco-RD | 4156 | CG2048-RD | 390..1712 | 17..1339 | 6615 | 100 | Plus |
| dco-RC | 3667 | CG2048-RC | 1002..2324 | 17..1339 | 6615 | 100 | Plus |
| dco-RB | 3062 | CG2048-RB | 397..1719 | 17..1339 | 6615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31056529..31057851 | 1339..17 | 6615 | 100 | Minus |
| X | 23542271 | X | 12655570..12656098 | 255..783 | 665 | 75 | Plus |
| 2L | 23513712 | 2L | 17554862..17555045 | 712..529 | 290 | 77.2 | Minus |
Blast to na_te.dros performed 2014-11-27 00:53:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-A | 13424 | TART-A 13424bp | 11012..11127 | 880..1004 | 116 | 60.8 | Plus |
BS25507.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-02 15:29:30 Download gff for
BS25507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dco-RC | 565..1885 | 17..1337 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:37:36 Download gff for
BS25507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dco-RB | 397..1717 | 17..1337 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:12:44 Download gff for
BS25507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dco-RB | 397..1717 | 17..1337 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:12:44 Download gff for
BS25507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31056531..31057851 | 17..1337 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:37:36 Download gff for
BS25507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26882253..26883573 | 17..1337 | 100 | | Minus |
BS25507.pep Sequence
Translation from 16 to 1338
> BS25507.pep
MELRVGNKYRLGRKIGSGSFGDIYLGTTINTGEEVAIKLECIRTKHPQLH
IESKFYKTMQGGIGIPRIIWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF
SLKTVLLLADQMISRIDYIHSRDFIHRDIKPDNFLMGLGKKGNLVYIIDF
GLAKKFRDARSLKHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLG
YVLMYFNLGALPWQGLKAANKRQKYERISEKKLSTSIVVLCKGFPSEFVN
YLNFCRQMHFDQRPDYCHLRKLFRNLFHRLGFTYDYVFDWNLLKFGGPRN
PQAIQQAQDGADGQAGHDAVAAAAAVAAAAAASSHQQQQHKVNAALGGGG
GSAAQQQLQGGQTLAMLGGNGGGNGSQLIGGNGLNMDDSMAATNSSRPPY
DTPERRPSIRMRQGGGGGGGGVGVGGMPSGGGGGGVGNAK*
BS25507.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:11:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dco-PD | 440 | CG2048-PD | 1..440 | 1..440 | 2325 | 100 | Plus |
| dco-PC | 440 | CG2048-PC | 1..440 | 1..440 | 2325 | 100 | Plus |
| dco-PB | 440 | CG2048-PB | 1..440 | 1..440 | 2325 | 100 | Plus |
| dco-PA | 440 | CG2048-PA | 1..440 | 1..440 | 2325 | 100 | Plus |
| CkIalpha-PG | 337 | CG2028-PG | 13..336 | 2..321 | 1071 | 61.7 | Plus |
