BS25534.complete Sequence
3302 bp assembled on 2011-09-19
GenBank Submission: KX806273
> BS25534.complete
GAAGTTATCAGTCGACATGAACGATGCAATGGAAGAAATGCTGCTTCGAC
CAGCCATTATCACCTGCCCGGAAGTGCGCACCAAACCTACTCCTCCAAAC
TTATCGCGCAGCAAATCCAAAGCTTCTGTGGCAGTTAATTTGGGCGAACC
TCCTGTTCAAATCGGCCGGGATAATCTTGGCAGCTCGGAGAGCTGCAGCT
CCATTCTTCTTGACTACGTTAATGATCAAAGCAAGCAACTCAAGTCGGAC
CTGCAGGCCGAGCAGTCAAACTCACTGAAATCGATGAGGCTAAAGAGTTT
GCTTGAGCGCATTGAGAAAATTCGAGTCCAGCTGTTGGAGGAACTGAAGG
CGGGTGAGTCAGGTGCATCAAAGGGTGACAATGCACAGGAATTGAATAAT
ATACGTCAGGAGCGAGCTGATATTCTATCCGAGCGAACGAGAACTTTAAA
CGAACGAGAATCTGATTTGCAACAGAAGGAGGCTATTCTCGAGCAGCGTC
TAAGAAAGTTCTACAAGGAGACAAAAAACGCAAAATCCAGTGAGAGTGAT
AAGCCAAAATCAAACGCAAAAGAAGATGGGCCAGTTGAGATCATTATTAA
GGTGAGGAGTGACGGTACTGTTAAGCAATATGTACCGAGAACAAAATCGA
AAGCCAAAACCAAGCCGTCGGCTATCGACAATGAAAAGGATGTGCCCCTG
GGCTCAACTGACAGCACACCAAGAGACGATGAGCCAAAGCCGACGGAACA
GGATCACGGAAAGCGACCATTCTTACAGGATCAGCGTCAGATATCCATTG
ATTCCAACTCCACTGCCTATCGCAGTCTGCCGCCAGTGAGCTATAAAAAT
ATGACCACGGCCGCTCCCCCTTCTGCTCCATTACATCCCATGGTGGTTCA
ATATATAAATCGTCTGCTAGGAATGACACGCCAAAATATCGATGAGATGG
GTGTGAGTTCCTCGTGTGTGACCACACCATCAACGTCGGTGATCAACTCA
TTGAGAAACGTAACCCCTTGTCCCGAGCCTGAAGCGGGAAGAGCTGAAAG
GGATCAGGATGAAAATACGGAGATGAACGAGCATCGCATGGAGCGGGTGC
AAACCTTTATTGCCGACAATCGCAGCTTAATCAATGACTTGGAAGAATCA
ATACGTTGCCAGCAGCAGCTGCAAAGGGAGCAACAATCGCTGGATGCAGA
GAAAAGTATGCGCGCATTCGATCAAATATGGAACAAGCGTTTGGCCAAGA
ATCCTGAAGATTGTCAGCAAACCAACAAAGAGAAAGAGCAAACAAGAGAA
AAGATGCCAAGGGAAAGGCCGACTCCACAAGGAGATAGGAAAAATGCAGC
ACCTCCACAGGAAAGCGGCAAAATTCGTAGAACTCAAGAAGGGGACCGGC
AGCAGCAAACAAACGGTGCAGTGCAACAAAAAAGGGAGCAAAAGACTGTA
AAACAAGGTTCAGGCGCCGATAAAAGCACAAACCGCTTTGCCCCCGAAAA
ATCGAAAGCACTATCCACCAGTGAGGAGTCATCTGCCCGAAACATGGAAC
GCTATGCACAGCTCACGGAGAACTGCACCCAGCGGATCGCCGAACTTACA
GAGCTGATCACGAAAGTGCGCGAGGAGAAGCAGCGACTGGTGGAGGTCAC
CCTCACATCGAACAGCGATGGCGAGCGGCAGTCCACTGAATATCTTGAGC
TTCCAACAGGACAACAGCAAACCAGATGCCGGACAATTTCCGATCGCAGC
GATTCTCAAACACCTTCGACCTCGGAAGCCTTGCCGTTGCAGAAGCACAA
GCCGACAGCGGCCAGCAGGGATAGTGGCATTGCGGACTCACGTCCAATTA
CGGCACAGGGTCAGGTTTGTATCGATGTGGAACCCATCTCGCTTGGGTCA
TCAACGCAGAATAATACAGCACGCGGACGAGTAAGGGCACCTCCGGCCAC
GATTCGTCGGTATAGTCCTCAACTAAACGCCGAGGATCTGGCGCACGAGC
TGTCGACCATTACAGAAGTGGAAACGCCAGGACAATCACATATTGTGGCC
GCCACACCGGTGCCCAAGCCATTCCCTAGTTTCGATCAGTATGCCAAGGA
ACTGCACTTAGATCTGTCGCGGTTGGATGCTGATCAGAGCCAACGGCTGC
AGGGCGAATTTAATGACTTAATACTCGCGATCAGGCAACGCAATCAAGGA
ACTGACTACCGTGAGTTTCCTAGCATTAATGCCTATCTTCATAACATGAC
TAGCACCCGAATCCATGTGGAGATAGGTCAGGATGCAGATCAGGCCACTC
TGTCACCGGGTGAACTGATGCGACAGCTGCGCGTGATCACTCATAGTATC
CAAGACTTTCCCAAGCGCAGGGAATACTTTGAAAAACTTATGGCCAAGCA
ACCACCCGATCAGAGGGATCTAATAGACAGTGCTAGCTTAGAGAATGATT
CCACGGATTCATTTAACGTAGAGGAAGAACTCCGCCAGCGGAAAATTCTA
AAGAACTCATTTCGTCGAGGAAACGCAACTGAGACCACATTGACGGCTCA
GGAGGTGGCTAGCAGTACGCGGCGGGAAAGCGTCGCCCCAGTGACCAACG
ATCAACCCAACGAGAGTGGCATAGATCCCCTCTCCGGCAGCAACTTTTCC
AGCGACGCGGATCAGAGAAGTCCGTGCTGGCATGCCACAATGCATGAGAG
GCAACAGCAGGTGGATGAGTTGTGCAGCAGTACCACAGCCTCGTCGCCAG
AACGGCGGCCACGAAAGTCTCGGCTTCGTGGAGGCCACGAGCACAACAAT
AGGTCTAAGGACGATTCCACTGTGCAGGATGCAAGCCAGATAGGAAGATC
CCTTAATCTGAGGGAATTCCTTACGAGAGAGCTCCTCAAACATCGAGTGC
ACGACGACGTTGCCAGTGAGAGTTCAGATGAGTCCTTAAGGGGGCACTTT
CTGAAGTCGGTCCTACATTCGCTCTCGCCCAGCAACAACACGCAAACGCC
AGGAGTGGGTGTAAGCCATGCCACCGGAGCAACAAACGACAGACAAAAGA
CATCCACACCAGTGGGATCGTTCCTCTCCATTCCAGAGAAGGCCGGGTCC
ATGAGTAACACCGGCTCTCAACTGTTCTCCGGGGAGAGTCGCATCTCCCT
GGTTAACTATCCAGATGGAACTCCACCCATTCCTTTTGAACAACAAAGCA
AACTTAGTACAAATCAAACTCGCCAATCCTCAGGTCAAATAGGATCAGGT
GTCAGGACAACGCATCGAAAGTCGCCCCGAAAATGAAAGCTTTCTAGACC
AT
BS25534.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:46:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ana1-RC | 5190 | CG6631-PC | 1921..5190 | 17..3286 | 16335 | 100 | Plus |
| ana1-RA | 5190 | CG6631-PA | 1921..5190 | 17..3286 | 16335 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:46:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ana1-RC | 5610 | CG6631-RC | 2131..5400 | 17..3286 | 16335 | 100 | Plus |
| ana1-RA | 5526 | CG6631-RA | 2047..5316 | 17..3286 | 16335 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:46:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24532916..24536185 | 17..3286 | 16335 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:46:00 has no hits.
BS25534.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-19 10:10:58 Download gff for
BS25534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ana1-RA | 2029..5291 | 17..3279 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:26:14 Download gff for
BS25534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ana1-RA | 2047..5309 | 17..3279 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:04:18 Download gff for
BS25534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ana1-RA | 2047..5309 | 17..3279 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:04:18 Download gff for
BS25534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24532916..24536178 | 17..3279 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:26:14 Download gff for
BS25534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20358638..20361900 | 17..3279 | 99 | | Plus |
BS25534.pep Sequence
Translation from 16 to 3285
> BS25534.pep
MNDAMEEMLLRPAIITCPEVRTKPTPPNLSRSKSKASVAVNLGEPPVQIG
RDNLGSSESCSSILLDYVNDQSKQLKSDLQAEQSNSLKSMRLKSLLERIE
KIRVQLLEELKAGESGASKGDNAQELNNIRQERADILSERTRTLNERESD
LQQKEAILEQRLRKFYKETKNAKSSESDKPKSNAKEDGPVEIIIKVRSDG
TVKQYVPRTKSKAKTKPSAIDNEKDVPLGSTDSTPRDDEPKPTEQDHGKR
PFLQDQRQISIDSNSTAYRSLPPVSYKNMTTAAPPSAPLHPMVVQYINRL
LGMTRQNIDEMGVSSSCVTTPSTSVINSLRNVTPCPEPEAGRAERDQDEN
TEMNEHRMERVQTFIADNRSLINDLEESIRCQQQLQREQQSLDAEKSMRA
FDQIWNKRLAKNPEDCQQTNKEKEQTREKMPRERPTPQGDRKNAAPPQES
GKIRRTQEGDRQQQTNGAVQQKREQKTVKQGSGADKSTNRFAPEKSKALS
TSEESSARNMERYAQLTENCTQRIAELTELITKVREEKQRLVEVTLTSNS
DGERQSTEYLELPTGQQQTRCRTISDRSDSQTPSTSEALPLQKHKPTAAS
RDSGIADSRPITAQGQVCIDVEPISLGSSTQNNTARGRVRAPPATIRRYS
PQLNAEDLAHELSTITEVETPGQSHIVAATPVPKPFPSFDQYAKELHLDL
SRLDADQSQRLQGEFNDLILAIRQRNQGTDYREFPSINAYLHNMTSTRIH
VEIGQDADQATLSPGELMRQLRVITHSIQDFPKRREYFEKLMAKQPPDQR
DLIDSASLENDSTDSFNVEEELRQRKILKNSFRRGNATETTLTAQEVASS
TRRESVAPVTNDQPNESGIDPLSGSNFSSDADQRSPCWHATMHERQQQVD
ELCSSTTASSPERRPRKSRLRGGHEHNNRSKDDSTVQDASQIGRSLNLRE
FLTRELLKHRVHDDVASESSDESLRGHFLKSVLHSLSPSNNTQTPGVGVS
HATGATNDRQKTSTPVGSFLSIPEKAGSMSNTGSQLFSGESRISLVNYPD
GTPPIPFEQQSKLSTNQTRQSSGQIGSGVRTTHRKSPRK*
BS25534.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ana1-PC | 1729 | CG6631-PC | 641..1729 | 1..1089 | 5546 | 100 | Plus |
| ana1-PA | 1729 | CG6631-PA | 641..1729 | 1..1089 | 5546 | 100 | Plus |
