BS25535.complete Sequence
3968 bp assembled on 2011-09-19
GenBank Submission: KX800626
> BS25535.complete
GAAGTTATCAGTCGACATGATGAGCGCCGGAGGAACCTACATCTCCACCG
CCAGCGTGGAGGTGCCACAAGCTCTGCAAGATGGCGAGAAGTTCATTCGA
TGGGATGATGACTCGGGCACTGGAACACCGGTTACAATGCGCGTCGATGC
CAAGGGCTTCTTCCTCTACTGGGTCGACCAGAACAACGAGCTGGATATCC
TTGATATAGCCACCATACGCGACGTTCGCACAGGACAGTACGCTAAGCGA
CCAAAGGACAACAAGCTGCGCCAGATTGTGACGCTGGGCCCCCAGGACAC
GCTCGAGGAGAAGACAGTGACGGTATGCCACGGCTCGGACTTCGTCAACA
TGACGTTCGTCAACTTCTGCTGCACCCGGCGGGACATAGCCCAGCTCTGG
ACCGACGGACTCATCAAGTTGGCCTACAGCTTGGCCCAGCTCAATGGCTC
GGCGATTATGTTCCTGCAGAAGGCCCATACCAAACTGTGTCTCCAGGTGG
ACAAAAGCGGCCGCATACCAGTGAAAAACATCATAAAACTTTTTGCCCAA
AACAAGGAGGATCGCAAACGTGTCGAGAAGGCGCTGGACGTGACCGGTTT
GCCGTCGGGAAAGGTCGATAGCATATCGGTGTCCAAATTTCAATTCGAGG
ACTTTTACAATTTGTACAAATATCTCACGCAGCGTTCGGAGGTGGAACGC
CTCTTTGACAGCATCGTTGGCAACTCGAAGCGCAAGTGCATGTCCATCGC
TCAACTGGTGGAGTTCCTGAACAAGACACAGCGTGATCCCCGCCTGAACG
AGATCCTCTACCCTTATGCGAATCCCGCCCGCGCCAAGGAGCTCATCCAG
CAATATGAGCCCAACAAGTTCAATGCGCAAAAGGGCCAACTCAGCCTGGA
TGGCTTTTTGAGGTACTTAATGGGCGACGACAATCCCATCATGGCGCCCA
GCAAGCTCGATCTCTGCGATGACATGGACCAGCCGATGTCGCACTACTTC
ATCAACTCCTCGCATAACACCTACTTGACGGGACACCAGCTGACCGGCAA
GTCGTCCGTCGAGATTTACAGGCAGTGTCTCCTGGCGGGATGCAGATGCG
TTGAGCTCGACTTCTGGAACGGACGCACCGAGGAGCCAGTCATTGTCCAC
GGCTATACGTTCGTGCCCGAGATATTTGCCAAGGACGTGCTGGAGGCCAT
CGCAGAGAGTGCATTTAAAACATCCGAATACCCTGTGATATTGAGCTTTG
AGAATCACTGCAACCCTAGGCAACAGGCGAAAATTGCCAACTATTGTCGC
GAAATATTTGGCGATATGCTGCTCGATAAGCCTCTGGACTCTCATCCGCT
GGAGCCGAACATGGACTTGCCACCGCCGGCGATGCTGCGCCGCAAGATTA
TAATCAAGAACAAGAAGAAGCATCACCACCACCATCACCATCATCACCAC
AAAAAGCCAGCGCAGGTGGGCACGCCGGCAGCCAACAACAAACTGACTAC
AGCGAATTCAGTGGATGCCAAGGCGGCGCAACAAGTCGGTTTGTCGGCCT
CGCATGAGGATGGGGGCGTGACCAGGAGCACCGCCAACGGTGACGTTGCC
ACTGGAACAGGAACCGGAAGTGCTGCTGGGACAGCAGGACACGCGCCGCC
GTTGCAACAAATCCGCCAAAGCTCCAAAGACAGCACTGGATCCTCCGATT
CGGACAGCTCTTCGGAGGATGAATCCCTGCCTAACACCACGCCCAATTTG
CCCAGCGGCAACGAACCTCCGCCAGAAAAGGCTCAAAAGGAAACGGAGGC
GGGAGCAGAGATTTCAGCTTTGGTCAACTATGTTCAGCCCATCCATTTTA
GCTCTTTTGAGAATGCGGAAAAAAAGAATCGATGCTACGAAATGTCTTCG
TTTGATGAAAAACAGGCGACAACATTATTGAAGGAGCGACCGATTGAATT
TGTGAACTACAACAAACACCAATTATCTCGTGTCTATCCGGCGGGCACTC
GCTTTGATAGCTCCAACTTTATGCCGCAGTTGTTCTGGAATGCCGGATGT
CAGCTCGTGGCACTTAACTTCCAAACCCTCGATCTGGCCATGCAACTCAA
CTTGGGGATCTTTGAGTATAACGCTCGGTCCGGTTATCTACTTAAGCCGG
AGTTTATGCGCCGATCAGATCGCAGATTGGATCCCTTCGCGGAAAGCACT
GTGGATGGCATCATAGCAGGCACAGTATCAATCACGGTTCTATCTGGTCA
GTTTCTCACGGATAAGAGGGCGAACACTTTTGTGGAAGTTGATATGTACG
GTTTGCCAGCGGACACGGTGAGAAAGAAGTTTCGCACCAAGACAGTGCGG
GATAATGGAATGAATCCCCTTTATGACGAGGAGCCGTTCGTGTTTAAGAA
GGTGGTTCTCCCCGAGTTGGCGAGCATTCGAATTGCAGCATATGAAGAGG
GTGGCAAACTCATTGGTCACCGCGTTTTGCCCGTAATCGGTCTTTGCCCT
GGTTACCGACATGTGAATCTCCGATCTGAAGTGGGTCAACCAATAGCCCT
TGCCTCTCTTTTCCTGTGCGTGGTGGTCAAGGATTATGTACCCGATGATC
TTTCCAATTTCGCAGAGGCGCTAGCTAACCCTATTAAATACCAAAGTGAG
CTAGAGAAGCGCGATATTCAACTATCTGTTTTGACCGACGAAGCCGAAGC
GCTGGGCAGTGCGGACGAGGATCTCTCCAAGTCGTTCGTTTTCGTCCAAG
TAGGTGGCCAAAAAAAGGAGCTGCGTCCGGTTGAATCGCTTGCGACTTCG
CCGAAGCATAGGCCGAGCATCTCGGCCGCCGCAGCAATGAGTGTTGACGT
TACCGTGGATCGGACCGATGGCGGAAGGGGAGAAGATAGCATCTCTATTG
TAGCACCCTCAATACAGCATCAGCACTCTCTAGACCAGTCCGTAAGCACC
TCCATCCGACAGGTGGAGTCCTCGCAGTTTGATGTCGATCTTGTGTTGGC
GGAGCCGCTGGAAAAGATATTGGATCACAAGTCCGTCAAGGAAAAGCGTC
TCGAGATGGAAAAGAAGCTGGAGTCACTGCGAAAGAAGCATGACAAGGAA
AAGATTAAGATCGCCGGCCAGAAATCCAGTCCGCTAGAGGGCAAGAAGCC
GAAGTTTGCCATCACGAATAAGCTGGTGAAGCGGCTAAGCAACAAGAGTC
TCGAGCCTGGTGTAGAGATCCCCGCCTGCCCTCTGGATCTGGGCGATAGC
AGCGAGGAGAGTGCAGCCGCGGATGCCGGTGAGGACTTAGCCGGTGGGAG
CAGCAGTCTGGATGGCAGAACTCAAGAGTCGCGATTACGCAGTGCCTGCC
GGGAGTACACTTCCCAGTACCGTGAGCTGCAGGAGAAGTACCATGAGGCA
ATTTACAGTGCAGCCGAGAAGGTGCTGAAGACATCGCAAACTGGGCAAAC
AAAGCAGTTAAAAGCATCTCTGGACAAGGTCACTGGAGAGGTTATGCACC
AGCTGCAGGAGGCCCGCCGCAACGAGGTTAAGAATCTGGCCACCGTGCAC
CGGGATCGTGATGAGCTGATCAGAATGAAACGCGAGGTGGCAAGCTCCGT
TGTGGAACGTGGCGTAGCTGAACGTGTGCGGCTGAAGCAGACCTTTGACC
GGAGAACGGATGAACTTCAGAAGCAGCACGACTCAGTGCGCAATGCCCTG
GCAGAGCACCGCTCCAAGGCTCGTCAAATTCTCGACAAGGAGGCAGAATC
GCGAAGCTGTGTATCCAGCAATGGCTTCTTGGTCCTCTTCCATGGACCTC
ATCACCATGGCTGTACGGGCTCCGGCTCGTCAGCCCTTTCAGGCAATAAT
CTCACTCTAAATCTGGACGCGGGGGCTGCCGGTAGTCATTCAGCCATTTC
GCCGGCAAAGTCGCACAACAGCATCGCAGCAGCGGCCGAGATGAAGACGT
AAAAGCTTTCTAGACCAT
BS25535.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:39:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Plc21C-RC | 3936 | CG4574-PC | 1..3936 | 17..3952 | 19680 | 100 | Plus |
| Plc21C-RD | 3957 | CG4574-PD | 1..3957 | 17..3952 | 19435 | 99.5 | Plus |
| Plc21C-RH | 3921 | CG4574-PH | 1..3921 | 17..3952 | 19420 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:39:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Plc21C-RC | 7347 | CG4574-RC | 741..4677 | 17..3953 | 19685 | 100 | Plus |
| Plc21C-RD | 7127 | CG4574-RD | 692..4649 | 17..3953 | 19440 | 99.5 | Plus |
| Plc21C-RH | 5419 | CG4574-RH | 692..4613 | 17..3953 | 19425 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:39:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 342866..343729 | 1872..2735 | 4320 | 100 | Plus |
| 2L | 23513712 | 2L | 344024..344489 | 2736..3201 | 2330 | 100 | Plus |
| 2L | 23513712 | 2L | 344576..344947 | 3202..3573 | 1860 | 100 | Plus |
| 2L | 23513712 | 2L | 339201..339441 | 1271..1511 | 1205 | 100 | Plus |
| 2L | 23513712 | 2L | 345213..345449 | 3717..3953 | 1185 | 100 | Plus |
| 2L | 23513712 | 2L | 342579..342792 | 1658..1871 | 1070 | 100 | Plus |
| 2L | 23513712 | 2L | 336349..336548 | 715..914 | 1000 | 100 | Plus |
| 2L | 23513712 | 2L | 337933..338119 | 1091..1277 | 935 | 100 | Plus |
| 2L | 23513712 | 2L | 336018..336203 | 529..714 | 930 | 100 | Plus |
| 2L | 23513712 | 2L | 337014..337198 | 911..1095 | 925 | 100 | Plus |
| 2L | 23513712 | 2L | 340705..340855 | 1507..1657 | 755 | 100 | Plus |
| 2L | 23513712 | 2L | 345006..345154 | 3571..3719 | 745 | 100 | Plus |
| 2L | 23513712 | 2L | 325678..325825 | 110..257 | 740 | 100 | Plus |
| 2L | 23513712 | 2L | 334118..334257 | 255..394 | 700 | 100 | Plus |
| 2L | 23513712 | 2L | 335412..335548 | 392..528 | 685 | 100 | Plus |
| 2L | 23513712 | 2L | 318028..318121 | 17..110 | 470 | 100 | Plus |
| X | 23542271 | X | 4359206..4359359 | 2011..2164 | 200 | 75.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:39:29 has no hits.
BS25535.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-19 10:17:27 Download gff for
BS25535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Plc21C-RC | 735..4668 | 17..3950 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:32:58 Download gff for
BS25535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Plc21C-RC | 741..4674 | 17..3950 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:24:09 Download gff for
BS25535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Plc21C-RC | 741..4674 | 17..3950 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:24:09 Download gff for
BS25535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 337938..338118 | 1096..1276 | 100 | -> | Plus |
| 2L | 342579..342792 | 1658..1871 | 100 | -> | Plus |
| 2L | 339207..339441 | 1277..1511 | 100 | -> | Plus |
| 2L | 340710..340855 | 1512..1657 | 100 | -> | Plus |
| 2L | 318028..318120 | 17..109 | 100 | -> | Plus |
| 2L | 325678..325824 | 110..256 | 100 | -> | Plus |
| 2L | 334120..334257 | 257..394 | 100 | -> | Plus |
| 2L | 335415..335548 | 395..528 | 100 | -> | Plus |
| 2L | 336018..336203 | 529..714 | 100 | -> | Plus |
| 2L | 336349..336546 | 715..912 | 100 | -> | Plus |
| 2L | 337016..337198 | 913..1095 | 100 | -> | Plus |
| 2L | 342866..343729 | 1872..2735 | 100 | -> | Plus |
| 2L | 344024..344489 | 2736..3201 | 100 | -> | Plus |
| 2L | 344576..344947 | 3202..3573 | 100 | -> | Plus |
| 2L | 345009..345153 | 3574..3718 | 100 | -> | Plus |
| 2L | 345215..345446 | 3719..3950 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:32:58 Download gff for
BS25535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 340710..340855 | 1512..1657 | 100 | -> | Plus |
| arm_2L | 337938..338118 | 1096..1276 | 100 | -> | Plus |
| arm_2L | 339207..339441 | 1277..1511 | 100 | -> | Plus |
| arm_2L | 342579..342792 | 1658..1871 | 100 | -> | Plus |
| arm_2L | 318028..318120 | 17..109 | 100 | -> | Plus |
| arm_2L | 325678..325824 | 110..256 | 100 | -> | Plus |
| arm_2L | 334120..334257 | 257..394 | 100 | -> | Plus |
| arm_2L | 335415..335548 | 395..528 | 100 | -> | Plus |
| arm_2L | 336018..336203 | 529..714 | 100 | -> | Plus |
| arm_2L | 336349..336546 | 715..912 | 100 | -> | Plus |
| arm_2L | 337016..337198 | 913..1095 | 100 | -> | Plus |
| arm_2L | 342866..343729 | 1872..2735 | 100 | -> | Plus |
| arm_2L | 344024..344489 | 2736..3201 | 100 | -> | Plus |
| arm_2L | 344576..344947 | 3202..3573 | 100 | -> | Plus |
| arm_2L | 345009..345153 | 3574..3718 | 100 | -> | Plus |
| arm_2L | 345215..345446 | 3719..3950 | 100 | | Plus |
BS25535.pep Sequence
Translation from 16 to 3951
> BS25535.pep
MMSAGGTYISTASVEVPQALQDGEKFIRWDDDSGTGTPVTMRVDAKGFFL
YWVDQNNELDILDIATIRDVRTGQYAKRPKDNKLRQIVTLGPQDTLEEKT
VTVCHGSDFVNMTFVNFCCTRRDIAQLWTDGLIKLAYSLAQLNGSAIMFL
QKAHTKLCLQVDKSGRIPVKNIIKLFAQNKEDRKRVEKALDVTGLPSGKV
DSISVSKFQFEDFYNLYKYLTQRSEVERLFDSIVGNSKRKCMSIAQLVEF
LNKTQRDPRLNEILYPYANPARAKELIQQYEPNKFNAQKGQLSLDGFLRY
LMGDDNPIMAPSKLDLCDDMDQPMSHYFINSSHNTYLTGHQLTGKSSVEI
YRQCLLAGCRCVELDFWNGRTEEPVIVHGYTFVPEIFAKDVLEAIAESAF
KTSEYPVILSFENHCNPRQQAKIANYCREIFGDMLLDKPLDSHPLEPNMD
LPPPAMLRRKIIIKNKKKHHHHHHHHHHKKPAQVGTPAANNKLTTANSVD
AKAAQQVGLSASHEDGGVTRSTANGDVATGTGTGSAAGTAGHAPPLQQIR
QSSKDSTGSSDSDSSSEDESLPNTTPNLPSGNEPPPEKAQKETEAGAEIS
ALVNYVQPIHFSSFENAEKKNRCYEMSSFDEKQATTLLKERPIEFVNYNK
HQLSRVYPAGTRFDSSNFMPQLFWNAGCQLVALNFQTLDLAMQLNLGIFE
YNARSGYLLKPEFMRRSDRRLDPFAESTVDGIIAGTVSITVLSGQFLTDK
RANTFVEVDMYGLPADTVRKKFRTKTVRDNGMNPLYDEEPFVFKKVVLPE
LASIRIAAYEEGGKLIGHRVLPVIGLCPGYRHVNLRSEVGQPIALASLFL
CVVVKDYVPDDLSNFAEALANPIKYQSELEKRDIQLSVLTDEAEALGSAD
EDLSKSFVFVQVGGQKKELRPVESLATSPKHRPSISAAAAMSVDVTVDRT
DGGRGEDSISIVAPSIQHQHSLDQSVSTSIRQVESSQFDVDLVLAEPLEK
ILDHKSVKEKRLEMEKKLESLRKKHDKEKIKIAGQKSSPLEGKKPKFAIT
NKLVKRLSNKSLEPGVEIPACPLDLGDSSEESAAADAGEDLAGGSSSLDG
RTQESRLRSACREYTSQYRELQEKYHEAIYSAAEKVLKTSQTGQTKQLKA
SLDKVTGEVMHQLQEARRNEVKNLATVHRDRDELIRMKREVASSVVERGV
AERVRLKQTFDRRTDELQKQHDSVRNALAEHRSKARQILDKEAESRSCVS
SNGFLVLFHGPHHHGCTGSGSSALSGNNLTLNLDAGAAGSHSAISPAKSH
NSIAAAAEMKT*
BS25535.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:57:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Plc21C-PC | 1311 | CG4574-PC | 1..1311 | 1..1311 | 6747 | 100 | Plus |
| Plc21C-PD | 1318 | CG4574-PD | 1..1318 | 1..1311 | 6729 | 99.5 | Plus |
| Plc21C-PH | 1306 | CG4574-PH | 1..1306 | 1..1311 | 6703 | 99.5 | Plus |
| Plc21C-PB | 1312 | CG4574-PB | 1..1312 | 1..1311 | 6675 | 98.9 | Plus |
| Plc21C-PA | 1312 | CG4574-PA | 1..1312 | 1..1311 | 6675 | 98.9 | Plus |
