BS25624.complete Sequence
2486 bp assembled on 2011-08-23
GenBank Submission: KX802596
> BS25624.complete
GAAGTTATCAGTCGACATGGATGTGGCAGATGCTCAGGTTGGCCAGCTGC
GCGTAAAAGACGAGGTGGGCATTCGGGCCCAGAAGTTGTTTCAGGATTTC
CTCGAGGAATTCAAGGAGGATGGCGAGATCAAGTACACGCGCCCAGCCGC
CAGCTTGGAATCCCCGGATCGCTGCACCCTGGAGGTCAGCTTCGAGGATG
TGGAGAAATACGATCAGAATCTGGCCACCGCCATTATCGAGGAGTACTAC
CACATCTATCCGTTCCTTTGCCAATCCGTTTCGAACTACGTTAAGGACCG
GATTGGACTGAAGACCCAGAAGGATTGCTATGTGGCCTTCACGGAGGTGC
CGACGCGTCACAAGGTTCGCGATCTGACCACCTCCAAAATCGGCACCCTC
ATCCGCATCTCCGGCCAGGTGGTGCGCACCCATCCCGTACATCCGGAGCT
TGTTTCCGGCGTCTTCATGTGCCTCGATTGCCAGACGGAAATTCGGAACG
TAGAGCAGCAGTTCAAGTTCACCAATCCCACCATTTGCCGCAATCCCGTG
TGCTCCAATCGCAAGCGTTTCATGCTGGATGTGGAGAAGAGTCTGTTCTT
GGACTTTCAAAAGATTCGCATCCAGGAGACGCAAGCCGAGCTGCCGCGTG
GCTGTATTCCCCGCGCGGTGGAGATTATCCTGCGCTCGGAGCTGGTGGAG
ACCGTTCAGGCTGGCGATCGCTATGATTTCACGGGCACTCTGATTGTGGT
GCCCGATGTGAGTGTCCTGGCCGGAGTGGGCACACGGGCGGAGAACAGTT
CACGCCACAAGCCCGGCGAGGGCATGGATGGCGTCACTGGCCTAAAGGCA
CTGGGCATGCGAGAGCTCAACTATCGGATGGCCTTCCTTGCCTGCAGTGT
TCAGGCAACGACAGCACGTTTTGGCGGCACCGATCTGCCCATGTCGGAGG
TGACAGCCGAGGATATGAAGAAGCAGATGACAGATGCCGAGTGGCACAAG
ATCTATGAGATGTCCAAGGATCGCAATCTCTACCAGAATCTAATTAGCAG
CCTCTTTCCCTCGATCTACGGCAACGATGAGGTCAAGCGGGGCATTCTTC
TGCAGCAATTCGGTGGCGTTGCGAAGACCACCACCGAAAAGACATCGCTT
CGTGGCGACATCAATGTGTGCATCGTTGGCGATCCCAGCACGGCCAAGTC
ACAGTTCCTCAAGCAGGTATCCGACTTCTCGCCGCGTGCGATCTACACCT
CGGGCAAGGCATCCTCGGCAGCGGGCTTAACCGCTGCGGTTGTGCGCGAC
GAGGAGTCCTTTGACTTTGTCATCGAGGCGGGCGCCCTCATGTTGGCCGA
CAATGGCATTTGCTGCATTGACGAGTTCGATAAGATGGATCAGCGCGATC
AGGTGGCCATTCACGAGGCCATGGAACAGCAGACCATATCGATTGCACGC
GCCGGCGTACGAGCCACACTCAATGCGCGCACTTCGATTCTGGCCGCCGC
CAATCCCATTAATGGTCGCTACGATCGCTCCAAGAGTTTGCAACAAAATA
TTCAGCTATCGGCACCGATTATGTCGCGATTCGATCTGTTCTTCATTCTC
GTGGACGAATGCAATGAGGTGGTGGACTATGCCATTGCTCGCAAGATCGT
TGATCTGCACTCGAACATCGAGGAGTCCGTGGAGCGGGCATATACGCGCG
AAGAGGTCCTTCGCTATGTGACATTTGCGCGGCAATTTAAGCCGGTTATT
AGCCAGGAGGCCGGACACATGCTGGTCGAGAACTATGGCCATTTGAGGCA
GCGCGATACGGGCACGTCGGGCAGGAGCACCTGGAGGATAACGGTGCGTC
AGCTGGAGTCCATGATTCGACTGAGCGAGGCCATGGCCAAGCTGGAGTGC
TCGAATCGCGTGCTGGAGCGACACGTCAAGGAGGCCTTCCGTTTGCTCAA
CAAGTCCATCATTCGCGTGGAGCAACCGGATATTCATTTAGATGACGACG
AGGGTCTGGACATGGACGATGGCATTCAGCACGACATCGACATGGAGAAC
AATGGAGCAGCGGCCAATGTGGATGAGAACAATGGTATGGACACATCCGC
CAGCGGCGCCGTGCAGAAGAAGAAGTTCACGCTTTCGTTCGAGGATTACA
AGAATCTGTCCACCATGCTGGTGTTGCATATGCGCGCCGAGGAGGCGCGC
TGCGAGGTGGAGGGCAACGATACGGGCATCAAGCGCAGCAATGTGGTCAC
CTGGTATCTGGAGCAGGTGGCGGACCAAATCGAATCCGAGGATGAGTTAA
TTTCTCGCAAAAATCTCATCGAGAAGCTTATCGATCGCCTCATCTATCAC
GATCAGGTCATTATTCCGCTCAAGACATCCACGCTGAAGCCGAGAATTCA
GGTACAAAAGGATTTCGTGGAGGAGGACGATCCCCTGCTGGTGGTGCATC
CCAACTACGTTGTGGAGTGAAAGCTTTCTAGACCAT
BS25624.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 02:05:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mcm6-RA | 2454 | CG4039-PA | 1..2454 | 17..2470 | 12270 | 100 | Plus |
| Mcm5-RA | 2202 | CG4082-PA | 1357..1400 | 1403..1446 | 190 | 95.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:05:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mcm6-RA | 2790 | CG4039-RA | 120..2573 | 17..2470 | 12270 | 100 | Plus |
| Mcm5-RA | 2452 | CG4082-RA | 1498..1541 | 1403..1446 | 190 | 95.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 02:05:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6674506..6676959 | 17..2470 | 12270 | 100 | Plus |
| 3R | 32079331 | 3R | 10790133..10790176 | 1403..1446 | 190 | 95.5 | Plus |
Blast to na_te.dros performed on 2014-11-27 02:05:57 has no hits.
BS25624.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-23 09:35:02 Download gff for
BS25624.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcm6-RA | 118..2570 | 17..2469 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:09:16 Download gff for
BS25624.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcm6-RA | 118..2570 | 17..2469 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:37:20 Download gff for
BS25624.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcm6-RA | 120..2572 | 17..2469 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:37:20 Download gff for
BS25624.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6674506..6676958 | 17..2469 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:09:16 Download gff for
BS25624.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6568539..6570991 | 17..2469 | 100 | | Plus |
BS25624.pep Sequence
Translation from 16 to 2469
> BS25624.pep
MDVADAQVGQLRVKDEVGIRAQKLFQDFLEEFKEDGEIKYTRPAASLESP
DRCTLEVSFEDVEKYDQNLATAIIEEYYHIYPFLCQSVSNYVKDRIGLKT
QKDCYVAFTEVPTRHKVRDLTTSKIGTLIRISGQVVRTHPVHPELVSGVF
MCLDCQTEIRNVEQQFKFTNPTICRNPVCSNRKRFMLDVEKSLFLDFQKI
RIQETQAELPRGCIPRAVEIILRSELVETVQAGDRYDFTGTLIVVPDVSV
LAGVGTRAENSSRHKPGEGMDGVTGLKALGMRELNYRMAFLACSVQATTA
RFGGTDLPMSEVTAEDMKKQMTDAEWHKIYEMSKDRNLYQNLISSLFPSI
YGNDEVKRGILLQQFGGVAKTTTEKTSLRGDINVCIVGDPSTAKSQFLKQ
VSDFSPRAIYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADNGICC
IDEFDKMDQRDQVAIHEAMEQQTISIARAGVRATLNARTSILAAANPING
RYDRSKSLQQNIQLSAPIMSRFDLFFILVDECNEVVDYAIARKIVDLHSN
IEESVERAYTREEVLRYVTFARQFKPVISQEAGHMLVENYGHLRQRDTGT
SGRSTWRITVRQLESMIRLSEAMAKLECSNRVLERHVKEAFRLLNKSIIR
VEQPDIHLDDDEGLDMDDGIQHDIDMENNGAAANVDENNGMDTSASGAVQ
KKKFTLSFEDYKNLSTMLVLHMRAEEARCEVEGNDTGIKRSNVVTWYLEQ
VADQIESEDELISRKNLIEKLIDRLIYHDQVIIPLKTSTLKPRIQVQKDF
VEEDDPLLVVHPNYVVE*
BS25624.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:18:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mcm6-PA | 817 | CG4039-PA | 1..817 | 1..817 | 4170 | 100 | Plus |
| Mcm2-PA | 887 | CG7538-PA | 184..784 | 25..653 | 804 | 31.8 | Plus |
| dpa-PB | 866 | CG1616-PB | 182..850 | 26..732 | 797 | 31.4 | Plus |
| dpa-PA | 866 | CG1616-PA | 182..850 | 26..732 | 797 | 31.4 | Plus |
| Mcm5-PA | 733 | CG4082-PA | 22..648 | 5..649 | 782 | 32.4 | Plus |
