BS25710.complete Sequence
737 bp assembled on 2011-08-02
GenBank Submission: KX803896
> BS25710.complete
GAAGTTATCAGTCGACATGCATTCCACAATGAGTGTACAACATGGGCTGG
TTGCCCTGGTACTGATCGGCTGTCTGGCACATCCGTGGCACGTCGAGGCC
TGCTCCAGCCGTACGGTGCCCAAGCCGCGCTCTTCGATCTCCTCGTCCAT
GTCCGGCACGGCATTGCCGCCGACCCAAGCTCCAGTCACTAGTAGCACCA
CAATGCGCACCACCACGACGACCACGCCCAGGCCCAATATTACATTCCCC
ACATACAAATGTCCGGAAACCTTCGATGCCTGGTACTGTTTGAACGATGC
CCATTGCTTTGCGGTGAAGATAGCCGATCTACCGGTTTACAGCTGCGAGT
GCGCGATTGGCTTTATGGGACAGCGATGCGAATACAAGGAGATCGACAAT
ACTTACCTGCCCAAGAGGCCGCGTCCGATGTTGGAGAAGGCGAGCATTGC
CAGTGGAGCCATGTGTGCCCTGGTATTTATGCTGTTTGTCTGCCTGGCCT
TCTATTTGCGCTTCGAGCAGCGGGCTGCCAAGAAGGCCTACGAACTGGAG
CAGGAACTGCAGCAGGAATACGACGATGACGACGGCCAGTGCGAGTGCTG
CCGCAACCGGTGCTGTCCAGATGGCCAGGAGCCAGTCATTCTGGAGCGCA
AGCTACCCTACCACATGCGGCTGGAGCACGCGCTAATGTCCTTCGCCATT
CGACGCAGCAACAAGCTGTGAAAGCTTTCTAGACCAT
BS25710.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:29:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spi-RF | 705 | CG10334-PF | 1..705 | 17..721 | 3510 | 99.9 | Plus |
| spi-RG | 705 | CG10334-PG | 1..705 | 17..721 | 3510 | 99.9 | Plus |
| spi-RA | 705 | CG10334-PA | 1..705 | 17..721 | 3510 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:29:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spi-RF | 1457 | CG10334-RF | 360..1064 | 17..721 | 3510 | 99.9 | Plus |
| spi-RG | 1576 | CG10334-RG | 479..1183 | 17..721 | 3510 | 99.9 | Plus |
| spi-RA | 1653 | CG10334-RA | 556..1260 | 17..721 | 3510 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:29:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19568293..19568997 | 721..17 | 3510 | 99.9 | Minus |
Blast to na_te.dros performed 2014-11-26 22:29:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmir\worf | 4174 | Dmir\worf WORF 4174bp Derived from AY144572. | 760..835 | 617..540 | 124 | 65.8 | Minus |
| Dmir\worf | 4174 | Dmir\worf WORF 4174bp Derived from AY144572. | 820..859 | 579..540 | 119 | 77.5 | Minus |
BS25710.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-02 12:42:35 Download gff for
BS25710.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spi-RA | 565..1268 | 17..720 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:00:01 Download gff for
BS25710.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spi-RA | 556..1259 | 17..720 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:02:45 Download gff for
BS25710.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spi-RA | 556..1259 | 17..720 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:02:45 Download gff for
BS25710.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19568294..19568997 | 17..720 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:00:01 Download gff for
BS25710.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19568294..19568997 | 17..720 | 99 | | Minus |
BS25710.pep Sequence
Translation from 16 to 720
> BS25710.pep
MHSTMSVQHGLVALVLIGCLAHPWHVEACSSRTVPKPRSSISSSMSGTAL
PPTQAPVTSSTTMRTTTTTTPRPNITFPTYKCPETFDAWYCLNDAHCFAV
KIADLPVYSCECAIGFMGQRCEYKEIDNTYLPKRPRPMLEKASIASGAMC
ALVFMLFVCLAFYLRFEQRAAKKAYELEQELQQEYDDDDGQCECCRNRCC
PDGQEPVILERKLPYHMRLEHALMSFAIRRSNKL*
BS25710.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:08:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spi-PF | 234 | CG10334-PF | 1..234 | 1..234 | 1269 | 100 | Plus |
| spi-PG | 234 | CG10334-PG | 1..234 | 1..234 | 1269 | 100 | Plus |
| spi-PA | 234 | CG10334-PA | 1..234 | 1..234 | 1269 | 100 | Plus |
| spi-PB | 234 | CG10334-PB | 1..234 | 1..234 | 1269 | 100 | Plus |
| spi-PE | 234 | CG10334-PE | 1..234 | 1..234 | 1269 | 100 | Plus |
