BS25711.complete Sequence
897 bp assembled on 2011-08-02
GenBank Submission: KX804519
> BS25711.complete
GAAGTTATCAGTCGACATGAAAATGGATGTTATTGCTCGGGAACAAATCA
TCTACGGTAGCCTGCAGGGATCAAACAAAAATAAAGATTGGACCAGCAGA
CTGCCACCGCCGTCGGCATACACTCTGGACCTGATGTCCAAGAAGGCCAA
GACGACAACCGGGGGCAGCAGCAATGGCAGCAATGCTACCGCCACATCCA
CAACCACATCCACATCCAGCAGTATTAAGCACAAGCAGCCGGCGGGCAGC
AGCAACAACAATGTTGGCCAAAGTCAGAGCAAGAAGACAAAGCCCAGCGG
CAGCTATAATAGCAATAGCAACTACTACTACTACGCTGCTGACGAGGAGG
AGGGCGGTAGCGCTGACTATGCACTGAGCAACTACGATAAGAAGGCTGTC
GAGGAGCTGTCCCTGCGATTGCTCGACGAACTGAGGGCGGCCAAGTCGCG
TCATTTGACCTGTACGGAAGTGTCGCTACCCTGTGATCTCACGCCGAGCG
TGGCCCGGGAAATAATCCGCGTGTCGGAGAAGGAGCCCCGCGGCATACGC
GGCTGCACCATCTACATTGAGTTCGAGGATGAGCCGAAGAATTCGCGTCG
CATTGCCTCGATCAAGGTCGATTCGGATACGGTGTCCACATTCGAAGTGT
ATCTGACCCTCAGGCAGGATCATCGCGGCTGGACGTCGCTGTTGCCGCAG
TTCATGAAGAGTTTGGCCCGCACGATCACCATCAGTCCGGAGTATACGAT
CACCAAGAATAAGCTATATTCCGCTGATGGTTTGGGTGCACGCAGGAGCT
ATAGCTTCGGCAGCCACGCCCATAGACCCAGTGCGGCCATCGCCACGCCC
ACCAACTAAAAGCTTTCTAGACCATTCGTGGGGGGGGGGAAAAGGGG
BS25711.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:30:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| scyl-RC | 843 | CG7590-PC | 1..843 | 17..859 | 4215 | 100 | Plus |
| scyl-RA | 843 | CG7590-PA | 1..843 | 17..859 | 4215 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:30:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| scyl-RC | 3124 | CG7590-RC | 585..1427 | 17..859 | 4215 | 100 | Plus |
| scyl-RA | 2195 | CG7590-RA | 585..1427 | 17..859 | 4215 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:29:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11253701..11254475 | 85..859 | 3875 | 100 | Plus |
| 3L | 28110227 | 3L | 11252891..11252960 | 17..86 | 350 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 22:29:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2472 | 164..334 | 207 | 61 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2291..2448 | 176..334 | 179 | 61.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..6868 | 181..334 | 143 | 60.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6845 | 246..331 | 131 | 64 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6809 | 246..322 | 126 | 64.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2314..2409 | 228..325 | 116 | 59.2 | Plus |
BS25711.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-02 12:42:36 Download gff for
BS25711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| scyl-RA | 582..1424 | 17..859 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:00:08 Download gff for
BS25711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| scyl-RA | 585..1427 | 17..859 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:02:50 Download gff for
BS25711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| scyl-RA | 585..1427 | 17..859 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:02:50 Download gff for
BS25711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11252891..11252960 | 17..86 | 100 | -> | Plus |
| 3L | 11253703..11254475 | 87..859 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:00:08 Download gff for
BS25711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11245991..11246060 | 17..86 | 100 | -> | Plus |
| arm_3L | 11246803..11247575 | 87..859 | 100 | | Plus |
BS25711.pep Sequence
Translation from 16 to 858
> BS25711.pep
MKMDVIAREQIIYGSLQGSNKNKDWTSRLPPPSAYTLDLMSKKAKTTTGG
SSNGSNATATSTTTSTSSSIKHKQPAGSSNNNVGQSQSKKTKPSGSYNSN
SNYYYYAADEEEGGSADYALSNYDKKAVEELSLRLLDELRAAKSRHLTCT
EVSLPCDLTPSVAREIIRVSEKEPRGIRGCTIYIEFEDEPKNSRRIASIK
VDSDTVSTFEVYLTLRQDHRGWTSLLPQFMKSLARTITISPEYTITKNKL
YSADGLGARRSYSFGSHAHRPSAAIATPTN*
BS25711.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:08:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| scyl-PC | 280 | CG7590-PC | 1..280 | 1..280 | 1434 | 100 | Plus |
| scyl-PA | 280 | CG7590-PA | 1..280 | 1..280 | 1434 | 100 | Plus |
| chrb-PE | 233 | CG7533-PE | 26..233 | 49..254 | 419 | 45.6 | Plus |
| chrb-PC | 299 | CG7533-PC | 92..299 | 49..254 | 419 | 45.6 | Plus |
