BS25713.complete Sequence
986 bp assembled on 2011-10-14
GenBank Submission: KX801126
> BS25713.complete
GAAGTTATCAGTCGACATGGTTAGGGAGAACAAGGCAGCGTGGAAGGCTC
AGTACTTCATCAAGGTTGTGGAACTGTTCGATGAGTTCCCAAAGTGCTTC
ATCGTGGGCGCCGACAACGTGGGCTCCAAGCAGATGCAGAACATCCGTAC
CAGCCTGCGTGGACTGGCCGTCGTGCTTATGGGCAAGAACACCATGATGC
GCAAGGCCATCCGCGGTCATCTGGAGAACAACCCGCAGCTGGAGAAGCTG
CTACCCCACATCAAGGGCAACGTGGGATTCGTGTTCACCAAGGGCGATCT
CGCCGAGGTGCGCGACAAGCTGCTGGAGTCCAAGGTGCGCGCCCCCGCCC
GTCCCGGCGCTATTGCCCCTCTGCACGTCATCATCCCGGCGCAGAACACC
GGCTTGGGACCCGAGAAGACCAGTTTCTTCCAGGCCCTGTCCATCCCGAC
CAAAATTTCCAAGGGAACAATTGAAATCATCAACGATGTGCCCATCCTGA
AGCCTGGCGACAAGGTCGGCGCCTCCGAGGCGACACTGCTCAACATGTTG
AACATCTCGCCCTTCTCGTACGGTCTGATTGTCAACCAGGTCTACGACTC
CGGCTCGATCTTTTCGCCGGAGATCCTGGACATCAAGCCCGAGGATCTGC
GCGCCAAGTTCCAACAGGGAGTGGCCAACTTGGCCGCCGTTTGTTTGTCC
GTGGGCTACCCCACCATCGCCTCGGCCCCGCACAGCATTGCCAACGGATT
CAAGAATCTGCTGGCCATTGCTGCCACCACCGAGGTGGAGTTCAAGGAGG
CGACCACCATCAAGGAGTACATCAAGGACCCCAGCAAGTTCGCCGCAGCT
GCTTCGGCTTCGGCTGCCCCCGCGGCCGGCGGAGCTACCGAGAAGAAGGA
GGAGGCCAAGAAGCCCGAGTCCGAATCAGAGGAGGAGGACGATGATATGG
GTTTCGGTCTGTTCGACTAAAAGCTTTCTAGACCAT
BS25713.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:45:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpLP0-RB | 954 | CG7490-PB | 1..954 | 17..970 | 4770 | 100 | Plus |
| RpLP0-RA | 954 | CG7490-PA | 1..954 | 17..970 | 4770 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:45:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpLP0-RB | 1328 | CG7490-RB | 203..1156 | 17..970 | 4770 | 100 | Plus |
| RpLP0-RA | 1211 | CG7490-RA | 86..1039 | 17..970 | 4770 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:45:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22076415..22077315 | 70..970 | 4505 | 100 | Plus |
| 3L | 28110227 | 3L | 22076288..22076342 | 17..71 | 275 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:45:46 has no hits.
BS25713.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-14 10:57:15 Download gff for
BS25713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpLP0-RA | 136..1087 | 17..968 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:35:58 Download gff for
BS25713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpLP0-RA | 86..1037 | 17..968 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:41:42 Download gff for
BS25713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpLP0-RA | 86..1037 | 17..968 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:41:42 Download gff for
BS25713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22076288..22076341 | 17..70 | 100 | -> | Plus |
| 3L | 22076416..22077313 | 71..968 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:35:58 Download gff for
BS25713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22069388..22069441 | 17..70 | 100 | -> | Plus |
| arm_3L | 22069516..22070413 | 71..968 | 100 | | Plus |
BS25713.pep Sequence
Translation from 16 to 969
> BS25713.pep
MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGL
AVVLMGKNTMMRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRD
KLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKG
TIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFS
PEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLA
IAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKP
ESESEEEDDDMGFGLFD*
BS25713.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:32:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpLP0-PB | 317 | CG7490-PB | 1..317 | 1..317 | 1600 | 100 | Plus |
| RpLP0-PA | 317 | CG7490-PA | 1..317 | 1..317 | 1600 | 100 | Plus |
