BS25714.complete Sequence
1031 bp assembled on 2011-08-02
GenBank Submission: KX802620
> BS25714.complete
GAAGTTATCAGTCGACATGGCCGCCATTAAGGACAGTCTGTTGGCCCAGG
TTGCTGAGGTCCTGCCCAGCTCCGGGCACAAGGTCACCATTGTGGGCATC
GGCCAGGTGGGCATGGCCAGCGCCTTCAGCATCCTGGCTCAGAACGTCTC
CAAGGAGGTGTGCCTCATCGATGTCTGCGCGGACAAGCTGCAGGGCGAGC
TGATGGATCTGCAGCACGGCTCCAACTTTCTGAAGAACCCCCAGATCACG
GCCAGCACCGACTTTGCCGCCTCGGCCAACTCCCGTCTGTGCATCGTGAC
CGCCGGAGTGCGCCAAAAGGAGGGCGAGTCCCGCCTGTCCCTCGTGCAGC
GCAACACCGACATCCTCAAGAACATCATCCCCAAGCTGGTAGAGTACAGT
CCCGATACCATTTTGCTTATGGTGTCCAATCCCGTGGACATCATGACCTA
CGTGGCCTGGAAGCTGTCCGGTCTGCCCAAGAACCGCGTGATCGGCAGCG
GCACCAACTTGGACTCGTCCCGCTTCCGCTTCCTGATGTCGCAGCGCCTG
GGCGTGGCACCCACCTCCTGCCACGGCTGGATCATCGGTGAGCACGGCGA
CAGCTCCGTGCCCGTTTGGTCTGGAGTGAACATTGCCGGCGTGCGTTTGC
GCGAGCTGAACCCCATTCTGGGCACCGGCGAGGATCCAGAGAAGTGGAAC
GAGCTGCACAAGCAGGTGGTGGACTCCGCCTACGAGGTGATCAAGCTAAA
GGGATACACCTCCTGGGCCATTGGCCTGAGCACCGCCTCCCTGGCCTCGG
CCATCTTGCGCAACACGAGCAGCGTGGCCGCCGTCTCCACCTCCGTTTTG
GGCGAACATGGCATTGACAAGGATGTGTTCCTCTCGCTGCCCTGCGTTCT
CAATGCCAACGGTGTGACATCCGTGGTCAAGCAGATCCTGACTCCCACCG
AAGTTGAACAACTGCAGAAGTCCGCCAACATCATGTCCGATGTCCAGGCT
GGTCTGAAGTTCTAAAAGCTTTCTAGACCAT
BS25714.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:32:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL3-RD | 999 | CG10160-PD | 1..999 | 17..1015 | 4995 | 100 | Plus |
| ImpL3-RC | 999 | CG10160-PC | 1..999 | 17..1015 | 4995 | 100 | Plus |
| ImpL3-RB | 999 | CG10160-PB | 1..999 | 17..1015 | 4995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:32:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL3-RD | 1350 | CG10160-RD | 98..1097 | 17..1016 | 5000 | 100 | Plus |
| ImpL3-RC | 1324 | CG10160-RC | 72..1071 | 17..1016 | 5000 | 100 | Plus |
| ImpL3-RB | 1778 | CG10160-RB | 139..1138 | 17..1016 | 5000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:32:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6259980..6260438 | 851..393 | 2295 | 100 | Minus |
| 3L | 28110227 | 3L | 6260505..6260882 | 394..17 | 1890 | 100 | Minus |
| 3L | 28110227 | 3L | 6259745..6259911 | 1016..850 | 835 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:32:03 has no hits.
BS25714.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-02 12:42:41 Download gff for
BS25714.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL3-RA | 138..1134 | 17..1013 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:01:13 Download gff for
BS25714.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL3-RB | 139..1135 | 17..1013 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:03:44 Download gff for
BS25714.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL3-RB | 139..1135 | 17..1013 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:03:44 Download gff for
BS25714.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6259748..6259910 | 851..1013 | 100 | <- | Minus |
| 3L | 6259981..6260436 | 395..850 | 100 | <- | Minus |
| 3L | 6260505..6260882 | 17..394 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:01:13 Download gff for
BS25714.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6252848..6253010 | 851..1013 | 100 | <- | Minus |
| arm_3L | 6253081..6253536 | 395..850 | 100 | <- | Minus |
| arm_3L | 6253605..6253982 | 17..394 | 100 | | Minus |
BS25714.pep Sequence
Translation from 16 to 1014
> BS25714.pep
MAAIKDSLLAQVAEVLPSSGHKVTIVGIGQVGMASAFSILAQNVSKEVCL
IDVCADKLQGELMDLQHGSNFLKNPQITASTDFAASANSRLCIVTAGVRQ
KEGESRLSLVQRNTDILKNIIPKLVEYSPDTILLMVSNPVDIMTYVAWKL
SGLPKNRVIGSGTNLDSSRFRFLMSQRLGVAPTSCHGWIIGEHGDSSVPV
WSGVNIAGVRLRELNPILGTGEDPEKWNELHKQVVDSAYEVIKLKGYTSW
AIGLSTASLASAILRNTSSVAAVSTSVLGEHGIDKDVFLSLPCVLNANGV
TSVVKQILTPTEVEQLQKSANIMSDVQAGLKF*
BS25714.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:09:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL3-PD | 332 | CG10160-PD | 1..332 | 1..332 | 1668 | 100 | Plus |
| ImpL3-PC | 332 | CG10160-PC | 1..332 | 1..332 | 1668 | 100 | Plus |
| ImpL3-PB | 332 | CG10160-PB | 1..332 | 1..332 | 1668 | 100 | Plus |
| ImpL3-PA | 332 | CG10160-PA | 1..332 | 1..332 | 1668 | 100 | Plus |
| CG13334-PB | 361 | CG13334-PB | 50..359 | 22..330 | 657 | 41 | Plus |
