BS25718.complete Sequence
1163 bp assembled on 2011-08-02
GenBank Submission: KX803922
> BS25718.complete
GAAGTTATCAGTCGACATGGAAAACCAATATCAGCGCATAGTCAGCGCCA
CTGCACGCGAGGATTCGCAGGCAAGGAGGAGCAAGCCCTTGTTTCTGAAT
GCCTGGTCGCAGACTTCTAGCGTGGACTTCGAGGTGCTTCGCAGCATCTC
CGCGCCGGACCCGCAAGTGGAGGTCGAGAACAGAGCGCTCCGCGATAAGG
TCCGCTACTTGGAGGCCAAACTGCAGCAGCACAAGGATCTGCTATCCCAG
ATTCATGCCACCTCCGCCAGGATGCAACAGGCATCCTCCCTGCTGGCAGA
AAGTAGACCACCCACGCCGCCCGCGGTCCAGAGCCACCACATTCTCACGC
CACCGAGTTCAGAGATATGTGCGCCCGCGCAGAATCCCCAGATTCTGGAC
TACAAGATCATCTCGGCACCCGACGATGCGGATGCCATTGAGATTCGCCT
GGCGGCGGAGAGTCTGAACAGCCTGAGCACCTCTGCGGACTCAGATCGCC
TGGAGATTTGCCTGGGCGACGAGAATCATCAGCAGAGCAATCATCACAAT
TCCCAGCAGCAGTACAGGATTAGCAACGGCATAAAGAGGGATGGTTCCTC
CGAGTCCGCCGACACTCCACTACAGTTCATCAAACGCCGCAAGCTGCAGG
AGATTCAGTTGCAGGAAGAAATCCCGCGGCAGAACATAAAACTACCAGCC
AAACCCCAAGTCAAAGCCCGTAATGGCAGTTTTACCGATCTCAACAAGGG
CCAACAGCAAAACATGGACAACGTGATGGTGTCCATTGGCCCGAACAACA
CCTGTGTGCCCGCCAGTGTCTTCGAGAATATTAACTGGTCGGTGTGCTCG
CTGGCCACCCGGAAACTACTGGTCACGATCTTCGACCGGGAAACTCTGGC
CACCCATTCGATGACGGGCAAGCCGTCGCCCGCCTTCAAGGATCAGGACA
AGCCGCTCAAGCGAATGCTCGATCCTGGGAAGATCCAGGACATCATATTC
GCAGTGACGCACAAGTGTAATGCCAGTGAGAAGGAGGTGCGCAACGCCAT
CACCACCAAGTGCGCCGACGAGAACAAGATGATGAAGATCCAGAACGTCA
AGCGACGCAGCAGTGGCATCAAACACGAAAAGGAGAACATTATTTAGAAG
CTTTCTAGACCAT
BS25718.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:32:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| insv-RB | 1131 | CG3227-PB | 1..1131 | 17..1147 | 5655 | 100 | Plus |
| insv-RA | 1131 | CG3227-PA | 1..1131 | 17..1147 | 5655 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:32:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| insv-RB | 1335 | CG3227-RB | 32..1165 | 15..1148 | 5670 | 100 | Plus |
| insv-RA | 1654 | CG3227-RA | 351..1484 | 15..1148 | 5670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:32:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2575450..2576572 | 1148..26 | 5615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:32:08 has no hits.
BS25718.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-02 12:42:42 Download gff for
BS25718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3227-RA | 362..1492 | 17..1147 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:01:16 Download gff for
BS25718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| insv-RA | 353..1483 | 17..1147 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:03:45 Download gff for
BS25718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| insv-RA | 353..1483 | 17..1147 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:03:45 Download gff for
BS25718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2575451..2576572 | 26..1147 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:01:16 Download gff for
BS25718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2575451..2576572 | 26..1147 | 100 | | Minus |
BS25718.pep Sequence
Translation from 16 to 1146
> BS25718.pep
MENQYQRIVSATAREDSQARRSKPLFLNAWSQTSSVDFEVLRSISAPDPQ
VEVENRALRDKVRYLEAKLQQHKDLLSQIHATSARMQQASSLLAESRPPT
PPAVQSHHILTPPSSEICAPAQNPQILDYKIISAPDDADAIEIRLAAESL
NSLSTSADSDRLEICLGDENHQQSNHHNSQQQYRISNGIKRDGSSESADT
PLQFIKRRKLQEIQLQEEIPRQNIKLPAKPQVKARNGSFTDLNKGQQQNM
DNVMVSIGPNNTCVPASVFENINWSVCSLATRKLLVTIFDRETLATHSMT
GKPSPAFKDQDKPLKRMLDPGKIQDIIFAVTHKCNASEKEVRNAITTKCA
DENKMMKIQNVKRRSSGIKHEKENII*
BS25718.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:09:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| insv-PB | 376 | CG3227-PB | 1..376 | 1..376 | 1918 | 100 | Plus |
| insv-PA | 376 | CG3227-PA | 1..376 | 1..376 | 1918 | 100 | Plus |
| Bsg25A-PA | 363 | CG12205-PA | 158..362 | 168..365 | 290 | 38.3 | Plus |
| Elba2-PA | 381 | CG9883-PA | 184..380 | 172..371 | 251 | 30.5 | Plus |
