BS25747.complete Sequence
2318 bp assembled on 2011-08-31
GenBank Submission: KX803784
> BS25747.complete
GAAGTTATCAGTCGACATGAGCTTGTGGAAGCGCATCTCCAGCCATGTCG
ACTGCGAGCAGCGTATGGCGGCTTACTACGAGGAGAAGGGTATGCTCGAG
CTGCGCCTCTGCTTGGCACCCTGGATCGAAGACAGGATAATGTCCGAACA
AATAACGCCCAACACTACCGATCAGTTAGAGCGCGTGGCCCTAAAGTTCA
ACGAAGATCTGCAGCAAAAGCTTCTATCCACGCGCACCGCCAGCGACCAG
GCCCTCAAGTTCCGGGTGGTGGAGCTTTGCGCCCTCATCCAACGCATCTC
CGCCGTTGAGCTGTACACGCATCTGCGCAGCGGTCTACAAAAAGAGTTGC
AGTTGGTCACCGAGAAGAGCGTGGCTGCAACCGCAGGCCAATCAATGCCG
CTAAATCCCTACAACATGAACAACACGCCCATGGTTACCGGGTACATGGT
GGACCCCAGTGATCTTCTGGCGGTGTCCAACAGCTGCAATCCTCCAGTTG
TTCAGGGCATAGGACCTATCCACAATGTGCAAAATACAGGCATTGCCTCC
CCAGCCCTCGGTATGGTCACACCCAAGGTGGAGCTGTACGAGGTGCAACA
TCAGATCATGCAGTCCCTCAATGAGTTTGGCAACTGTGCCAATGCCTTGA
AGCTGCTTGCCCAAAACTACAGTTACATGCTAAACTCCACATCCTCGCCG
AACGCAGAAGCTGCCTACAGAAGTCTTATCGATGAAAAGGCGGCCATCGT
ACTCACAATGCGTCGCAGCTTTATGTACTACGAATCGCTGCACGAGATGG
TCATACACGAGCTCAAGAACTGGCGCCACCAACAAGCGCAAGCCGGAAAC
GGAGCTCCCTTTAATGAGGGCTCCCTGGATGATATCCAGCGCTGCTTTGA
GATGCTCGAGAGCTTTATCGCACACATGCTGGCTGCCGTTAAGGAGCTGA
TGCGCGTACGTCTGGTCACCGAAGAGCCGGAGCTCACACATCTGCTTGAA
CAGGTGCAGAACGCGCAGAAGAACCTGGTATGCTCTGCCTTTATCGTCGA
CAAACAGCCCCCGCAAGTGATGAAGACCAACACACGCTTCGCAGCGTCTG
TGCGTTGGCTAATCGGTTCTCAGCTGGGCATTCACAACAATCCACCCACA
GTCGAGTGCATCATAATGTCAGAGATCCAGTCGCAACGGTTCGTTACGCG
CAATACACAGATGGATAATAGTAGCCTATCCGGTCAATCATCGGGCGAGA
TTCAAAACGCCTCTAGCACTATGGAGTATCAGCAAAACAACCATGTTTTC
TCCGCCAGCTTCCGAAACATGCAGCTGAAGAAGATCAAGCGGGCAGAAAA
GAAGGGCACTGAGAGCGTGATGGACGAGAAGTTCGCCCTGTTCTTCTACA
CCACCACCACCGTGAACGATTTCCAGATCCGTGTGTGGACCCTGTCCTTA
CCGGTGGTGGTTATTGTGCACGGCAACCAGGAGCCCCAGTCTTGGGCTAC
CATTACTTGGGACAATGCATTTGCGGAGATTGTTCGCGATCCCTTCATGA
TTACCGACCGCGTTACCTGGGCCCAGCTGTCAGTCGCGTTGAACATCAAA
TTCGGATCGTGCACAGGGCGTTCTCTGACCATTGATAACCTTGATTTCCT
ATACGAGAAACTCCAGCGTGAGGAGCGGTCTGAGTACATTACGTGGAACC
AATTCTGTAAGGAGCCCATGCCCGATCGGTCCTTTACATTCTGGGAGTGG
TTCTTTGCCATCATGAAACTCACCAAAGATCACATGTTGGGCATGTGGAA
AGCAGGCTGCATTATGGGCTTCATCAACAAGACCAAGGCTCAGACTGATC
TGCTGCGTTCAGTCTATGGTATCGGCACTTTCCTGCTCCGTTTCTCCGAC
AGCGAGCTCGGTGGAGTCACTATCGCCTACGTAAACGAAAATGGACTGGT
CACCATGCTAGCGCCATGGACTGCACGGGATTTCCAGGTGCTGAACCTGG
CCGATCGCATTCGAGATCTGGACGTGCTTTGCTGGCTGCACCCTAGCGAC
CGCAATGCGAGTCCCGTGAAGAGGGACGTCGCCTTCGGTGAGTTCTACTC
AAAGCGTCAAGAGCCCGAACCCCTCGTTCTAGATCCTGTGACCGGTTATG
TGAAGAGCACATTGCATGTTCACGTTTGTAGAAACGGAGAGAATGGATCT
ACTAGTGGAACACCGCATCATGCTCAGGAAAGCATGCAACTGGGAAATGG
TGACTTTGGAATGGCGGACTTCGATACGATTACAAACTTTGAGAACTTTT
GAAAGCTTTCTAGACCAT
BS25747.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:11:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Stat92E-RM | 2286 | CG4257-PM | 1..2286 | 17..2302 | 11430 | 100 | Plus |
| Stat92E-RF | 2286 | CG4257-PF | 1..2286 | 17..2302 | 11430 | 100 | Plus |
| Stat92E-RK | 2457 | CG4257-PK | 1..2232 | 17..2248 | 11160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:12:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Stat92E-RM | 4029 | CG4257-RM | 675..2963 | 16..2304 | 11445 | 100 | Plus |
| Stat92E-RF | 3873 | CG4257-RF | 519..2807 | 16..2304 | 11445 | 100 | Plus |
| Stat92E-RK | 4200 | CG4257-RK | 675..2907 | 16..2248 | 11165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20540523..20541553 | 1172..142 | 5155 | 100 | Minus |
| 3R | 32079331 | 3R | 20539975..20540457 | 1652..1170 | 2415 | 100 | Minus |
| 3R | 32079331 | 3R | 20539657..20539916 | 1912..1653 | 1300 | 100 | Minus |
| 3R | 32079331 | 3R | 20539400..20539601 | 2111..1910 | 1010 | 100 | Minus |
| 3R | 32079331 | 3R | 20539221..20539358 | 2247..2110 | 690 | 100 | Minus |
| 3R | 32079331 | 3R | 20541678..20541805 | 143..16 | 640 | 100 | Minus |
| 3R | 32079331 | 3R | 20537407..20537463 | 2304..2248 | 285 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:11:58 has no hits.
BS25747.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-31 09:30:18 Download gff for
BS25747.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Stat92E-RF | 521..2805 | 17..2301 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:47:49 Download gff for
BS25747.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Stat92E-RF | 520..2804 | 17..2301 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:20:35 Download gff for
BS25747.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Stat92E-RF | 520..2804 | 17..2301 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:20:35 Download gff for
BS25747.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20537410..20537463 | 2248..2301 | 100 | <- | Minus |
| 3R | 20539221..20539356 | 2112..2247 | 100 | <- | Minus |
| 3R | 20539400..20539600 | 1911..2111 | 100 | <- | Minus |
| 3R | 20539659..20539916 | 1653..1910 | 100 | <- | Minus |
| 3R | 20539975..20540454 | 1173..1652 | 100 | <- | Minus |
| 3R | 20540523..20541553 | 142..1172 | 100 | <- | Minus |
| 3R | 20541680..20541804 | 17..141 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:47:49 Download gff for
BS25747.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16363132..16363185 | 2248..2301 | 100 | <- | Minus |
| arm_3R | 16364943..16365078 | 2112..2247 | 100 | <- | Minus |
| arm_3R | 16365122..16365322 | 1911..2111 | 100 | <- | Minus |
| arm_3R | 16365381..16365638 | 1653..1910 | 100 | <- | Minus |
| arm_3R | 16365697..16366176 | 1173..1652 | 100 | <- | Minus |
| arm_3R | 16366245..16367275 | 142..1172 | 100 | <- | Minus |
| arm_3R | 16367402..16367526 | 17..141 | 100 | | Minus |
BS25747.pep Sequence
Translation from 16 to 2301
> BS25747.pep
MSLWKRISSHVDCEQRMAAYYEEKGMLELRLCLAPWIEDRIMSEQITPNT
TDQLERVALKFNEDLQQKLLSTRTASDQALKFRVVELCALIQRISAVELY
THLRSGLQKELQLVTEKSVAATAGQSMPLNPYNMNNTPMVTGYMVDPSDL
LAVSNSCNPPVVQGIGPIHNVQNTGIASPALGMVTPKVELYEVQHQIMQS
LNEFGNCANALKLLAQNYSYMLNSTSSPNAEAAYRSLIDEKAAIVLTMRR
SFMYYESLHEMVIHELKNWRHQQAQAGNGAPFNEGSLDDIQRCFEMLESF
IAHMLAAVKELMRVRLVTEEPELTHLLEQVQNAQKNLVCSAFIVDKQPPQ
VMKTNTRFAASVRWLIGSQLGIHNNPPTVECIIMSEIQSQRFVTRNTQMD
NSSLSGQSSGEIQNASSTMEYQQNNHVFSASFRNMQLKKIKRAEKKGTES
VMDEKFALFFYTTTTVNDFQIRVWTLSLPVVVIVHGNQEPQSWATITWDN
AFAEIVRDPFMITDRVTWAQLSVALNIKFGSCTGRSLTIDNLDFLYEKLQ
REERSEYITWNQFCKEPMPDRSFTFWEWFFAIMKLTKDHMLGMWKAGCIM
GFINKTKAQTDLLRSVYGIGTFLLRFSDSELGGVTIAYVNENGLVTMLAP
WTARDFQVLNLADRIRDLDVLCWLHPSDRNASPVKRDVAFGEFYSKRQEP
EPLVLDPVTGYVKSTLHVHVCRNGENGSTSGTPHHAQESMQLGNGDFGMA
DFDTITNFENF*
BS25747.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:02:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Stat92E-PM | 761 | CG4257-PM | 1..761 | 1..761 | 3973 | 100 | Plus |
| Stat92E-PF | 761 | CG4257-PF | 1..761 | 1..761 | 3973 | 100 | Plus |
| Stat92E-PC | 754 | CG4257-PC | 1..754 | 1..761 | 3919 | 99.1 | Plus |
| Stat92E-PE | 754 | CG4257-PE | 1..754 | 1..761 | 3919 | 99.1 | Plus |
| Stat92E-PK | 818 | CG4257-PK | 1..744 | 1..744 | 3879 | 100 | Plus |
