BS25804.complete Sequence
407 bp assembled on 2011-08-02
GenBank Submission: KX801689
> BS25804.complete
GAAGTTATCAGTCGACATGGCTCTGCACTCGGCAATCAAGGGAAAACTGA
TCAGCGTTATCGGCGACGAGGACACCTGTGTGGGCTTTCTGCTCGGCGGA
GTGGGCGAGATCAACAAGAATCGCCATCCCAACTTTATGGTGGTCGACAA
AAATACGGCCGTCAGCGAACTGGAGGACTGTTTCAAGCGTTTCCTTAAGC
GGGACGATATCGACATCATTCTAATCAACCAGAACTGCGCCGAGCTTATT
CGTCATGTGATCGATGCCCATACGTCGCCCGTGCCCGCTGTTTTGGAGAT
TCCCTCCAAGGACCATCCGTACGACGCCAGCAAGGACTCCATTCTGCGTC
GCGCCCGCGGCATGTTCAATCCGGAGGATCTGGTGCGCTAAAAGCTTTCT
AGACCAT
BS25804.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:52:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vha14-1-RA | 375 | CG8210-PA | 1..375 | 17..391 | 1875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vha14-1-RA | 659 | CG8210-RA | 98..477 | 12..391 | 1885 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15679608..15679987 | 391..12 | 1885 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:52:54 has no hits.
BS25804.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-02 14:31:30 Download gff for
BS25804.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vha14-1-RA | 99..471 | 17..389 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:37:14 Download gff for
BS25804.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vha14-1-RA | 103..475 | 17..389 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:12:20 Download gff for
BS25804.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vha14-1-RA | 103..475 | 17..389 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:12:20 Download gff for
BS25804.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15679610..15679982 | 17..389 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:37:14 Download gff for
BS25804.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 11567115..11567487 | 17..389 | 100 | | Minus |
BS25804.pep Sequence
Translation from 16 to 390
> BS25804.pep
MALHSAIKGKLISVIGDEDTCVGFLLGGVGEINKNRHPNFMVVDKNTAVS
ELEDCFKRFLKRDDIDIILINQNCAELIRHVIDAHTSPVPAVLEIPSKDH
PYDASKDSILRRARGMFNPEDLVR*
BS25804.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:11:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vha14-1-PA | 124 | CG8210-PA | 1..124 | 1..124 | 644 | 100 | Plus |
Vha14-2-PC | 124 | CG1076-PC | 1..121 | 1..121 | 387 | 57.9 | Plus |
Vha14-2-PB | 124 | CG1076-PB | 1..121 | 1..121 | 387 | 57.9 | Plus |
Vha14-2-PA | 129 | CG1076-PA | 51..126 | 46..121 | 231 | 56.6 | Plus |