BS25812.complete Sequence
887 bp assembled on 2011-09-21
GenBank Submission: KX803677
> BS25812.complete
GAAGTTATCAGTCGACATGAGTTCCGCGGTCAGCGAGTCCAAGCTCAAGG
AGTACTACGATGTGGCCCTGAAACTGGTCCTCAAGTGCGGGCCTCTGATG
CAGGAGGGCTATCAGAAGGCAAAGACGGAATACAAGGTCAAGGCGGACTT
CTACGACCTGGTGACCGTGTACGATAAGCAAATCGAGGATATTTTGACCG
AGGGATTGGTGGCCGCCTTTCCCGAATCCCTGATCATTGGCGAGGAGGAG
TCGGCAGTTTCACAGCGCCAGGCGGAGCTGACTGATGCACCCACGTGGAT
CATAGATCCCATCGACGGCACCACAAACTTCATTCACCGCATCCCGCACT
GCTGCATCTCCGTGGGCCTGGCCATCAACAAGGAGCTGGTCGTGGGCATT
ATCTACAATCCACCGGCGAATGAACTATTCTCCGCCTACAAGGGACACGG
AGCCTATCTGAATGGCGAACCCATCCACACATCCAAAGTGACGACGATCA
AGCAAGCAGTGATTGCCTACGAGATCTCCCTGATCCACGCCGCCGGAGTG
AGGGACAAGAATGTGAAGCGACTGTACAAGATGGCCTCGAATGCCACGGG
AACCAGGTGTTTCGGAAGTGCCGCCCTGACCCTGTGCTACGTGGCCACGG
GCCAGTGCGATGCCTATCATGTGGAGGATCTGAAACCGTGGGACATTGCT
GCCGGAGCCATCATTCTGACCGAAGCTGGCGGCACTGTGTGCCATACCAG
CGGATCCAAATTCGATGTGATGAAACCGGATTGCGTGTGCGCCGCCACGC
CGGAGTTGGCCAAGAATGTGATTAGTCTTATCGAAGAGGCCGGTCAGATT
ACAGAGTACACATTTAAGTAAAAGCTTTCTAGACCAT
BS25812.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:44:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17029-RB | 855 | CG17029-PB | 1..855 | 17..871 | 4275 | 100 | Plus |
CG17029-RA | 855 | CG17029-PA | 1..855 | 17..871 | 4275 | 100 | Plus |
CG17028-RB | 855 | CG17028-PB | 259..774 | 275..790 | 480 | 72.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:44:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17029-RB | 1167 | CG17029-RB | 207..1062 | 17..872 | 4280 | 100 | Plus |
CG17029-RA | 1004 | CG17029-RA | 44..899 | 17..872 | 4280 | 100 | Plus |
CG17028-RB | 893 | CG17028-RB | 278..793 | 275..790 | 480 | 72.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:44:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15977076..15977555 | 17..496 | 2400 | 100 | Plus |
3L | 28110227 | 3L | 15977954..15978330 | 496..872 | 1885 | 100 | Plus |
3L | 28110227 | 3L | 15978801..15978949 | 275..423 | 295 | 79.9 | Plus |
3L | 28110227 | 3L | 21267397..21267491 | 370..276 | 190 | 80 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:44:34 has no hits.
BS25812.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 16:48:10 Download gff for
BS25812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17029-RA | 53..905 | 17..869 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:32:30 Download gff for
BS25812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17029-RA | 44..896 | 17..869 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:25:32 Download gff for
BS25812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17029-RA | 44..896 | 17..869 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:25:32 Download gff for
BS25812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15977076..15977555 | 17..496 | 100 | -> | Plus |
3L | 15977955..15978327 | 497..869 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:32:30 Download gff for
BS25812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15970176..15970655 | 17..496 | 100 | -> | Plus |
arm_3L | 15971055..15971427 | 497..869 | 100 | | Plus |
BS25812.pep Sequence
Translation from 16 to 870
> BS25812.pep
MSSAVSESKLKEYYDVALKLVLKCGPLMQEGYQKAKTEYKVKADFYDLVT
VYDKQIEDILTEGLVAAFPESLIIGEEESAVSQRQAELTDAPTWIIDPID
GTTNFIHRIPHCCISVGLAINKELVVGIIYNPPANELFSAYKGHGAYLNG
EPIHTSKVTTIKQAVIAYEISLIHAAGVRDKNVKRLYKMASNATGTRCFG
SAALTLCYVATGQCDAYHVEDLKPWDIAAGAIILTEAGGTVCHTSGSKFD
VMKPDCVCAATPELAKNVISLIEEAGQITEYTFK*
BS25812.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:13:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17029-PB | 284 | CG17029-PB | 1..284 | 1..284 | 1473 | 100 | Plus |
CG17029-PA | 284 | CG17029-PA | 1..284 | 1..284 | 1473 | 100 | Plus |
CG17028-PB | 284 | CG17028-PB | 1..284 | 1..284 | 1054 | 69.4 | Plus |
CG17028-PA | 284 | CG17028-PA | 1..284 | 1..284 | 1054 | 69.4 | Plus |
CG17027-PB | 288 | CG17027-PB | 2..277 | 3..277 | 713 | 46.7 | Plus |