BS25922.complete Sequence
923 bp assembled on 2011-09-14
GenBank Submission: KX801808
> BS25922.complete
GAAGTTATCAGTCGACATGTCCACGCCCACTTCCCCGAAGACGCCCACAC
CGCCCACTTTGCCACCGGGCGTGACCAAAACATGTCACATTGTGAAAAGG
CCCGATTTCGATGGCTATGGTTTCAATTTGCATTCGGAGAAGGTGAAACC
AGGACAGTTTATTGGCAAAGTAGATGCGGATTCTCCGGCAGAGGCAGCCG
GCCTGAAGGAGGGCGATCGCATCCTGGAGGTCAACGGGGTGTCCATTGGC
AGCGAGACCCACAAGCAGGTGGTTGCCAGGATCAAGGCCATTGCGAATGA
AGTCCGCTTGCTGCTCATCGATGTGGATGGCAAGGCCTTGGAGGTGAAAC
CGGCATCTCCGCCAGCCGCTGCGTGCAATGGAAACGGTAGTGCCAGTCAG
AATGGATACGAGGGCACCAAACAGGAGATGCCCGGAGCAAGTGCCAATAT
CAGTAGCATCAGTATGGTGAGCACCAAGCGATCCTCAAATGCCAGCAGCA
TTCAGAGCGGCAGTACCATGAATGCCTCCGATTTGGATGTGGTCGATAGG
GGAATACCGGCAGTCGCTGCTCCGGTGGCTATCACCCCGCCTCCCGTTCA
AAATGGAAGTAAACCCTCATCGCCGATTAATAATAACACTTTGATGAGCA
CACCGCCACCGCCGTCCGCTACTAAGGCTGGCATCAACAACAATGGCAGT
GTTTATAACACCAATGGAAATGGTACAAATGGCATGACCACACCCACTAC
ACCACCCCCACCGACCAGTGGCTATAAGGCGGGCACCTTGCATTTACCAA
TGACGGCCGCCGAAATGCGCGCCAAATTGGCATCCAAGAAGAAGTACGAT
CCCAAGAACGAGAGTGTGGACCTCAAGAAGAAGTTCGACATCATTCAGAA
GCTCTGAAAGCTTTCTAGACCAT
BS25922.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:26:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sip1-RA | 891 | CG10939-PA | 1..891 | 17..907 | 4455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:26:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sip1-RA | 1717 | CG10939-RA | 436..1333 | 10..907 | 4460 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:26:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17403890..17404787 | 10..907 | 4460 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:26:07 has no hits.
BS25922.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-14 12:05:32 Download gff for
BS25922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sip1-RA | 440..1329 | 17..906 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:15:03 Download gff for
BS25922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sip1-RA | 443..1332 | 17..906 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:10:33 Download gff for
BS25922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sip1-RA | 443..1332 | 17..906 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:10:33 Download gff for
BS25922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17403897..17404786 | 17..906 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:15:03 Download gff for
BS25922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13291402..13292291 | 17..906 | 100 | | Plus |
BS25922.pep Sequence
Translation from 16 to 906
> BS25922.pep
MSTPTSPKTPTPPTLPPGVTKTCHIVKRPDFDGYGFNLHSEKVKPGQFIG
KVDADSPAEAAGLKEGDRILEVNGVSIGSETHKQVVARIKAIANEVRLLL
IDVDGKALEVKPASPPAAACNGNGSASQNGYEGTKQEMPGASANISSISM
VSTKRSSNASSIQSGSTMNASDLDVVDRGIPAVAAPVAITPPPVQNGSKP
SSPINNNTLMSTPPPPSATKAGINNNGSVYNTNGNGTNGMTTPTTPPPPT
SGYKAGTLHLPMTAAEMRAKLASKKKYDPKNESVDLKKKFDIIQKL*
BS25922.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:16:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sip1-PA | 296 | CG10939-PA | 1..296 | 1..296 | 1529 | 100 | Plus |