BS25924.complete Sequence
794 bp assembled on 2011-08-02
GenBank Submission: KX803060
> BS25924.complete
GAAGTTATCAGTCGACATGATACCCTATAATTATAATAGTCCAGACACTG
CCAAATACGTGAAACGCACCTGGGGAAAACACTGCAATGTTTTGCTATTT
GTGAGTGGGGATATCGATGGCGAGTTGGAACCCTATGTGCCTGTGATTAA
TTCCACGGATACATGGACTTTGGTCCAACAGGGGCTAATGCAGGCCTATC
TGTTCTATGCCGACCAAATCGATTGGTTCCTTAGAGTCGAGCCCTCTAGT
TTTGTAGTTTTGGAGAATCTCCGGTATATGATACACAAAAGGAAATATCA
ACCCAGTCAACCGATATATTTTGGCTACGAGCTCGAGAATATTGTTACCC
ATGAGTCCTTTGTCCACCATCATAGTGGGTATGTCATAAGTCGCGAGGCC
TTAAGAAGGTATACGATGGCGTCGAAGGATCCTGAGAACAAGGAGTGCAC
TCATTGGGAGGGATATGTTGAGGGTCTGGATATACATCGGTGCTTGAGAT
TTGCTAATGTAACGGTAGCAGAAAGTCGGGACGAATTTGAGCACGAGACA
TTCCTACCCGTTACAATGGATTACCAGTTCTTAAATGGCTATGATACTAT
ACCCTGGCTGCGTAAATTAAGTTATCACAAACGTACAGAGAAAACAGTTC
CCATATCCAGCCGCGCCATTTGTTTTCTGGTAGAATATCCGCCAGAAATG
TACGATTACTACTATTTTGTTTATCGATTGAAAATCTTTGGCACTCCCGT
CCGAAACTCCATAGACTTTAGGCCGTAAAAGCTTTCTAGACCAT
BS25924.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:22:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34451-RC | 762 | CG34451-PC | 1..762 | 17..778 | 3810 | 100 | Plus |
| CG34451-RA | 762 | CG34451-PA | 1..762 | 17..778 | 3810 | 100 | Plus |
| CG34451-RB | 501 | CG34451-PB | 1..501 | 278..778 | 2505 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:22:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34451-RC | 1172 | CG34451-RC | 153..915 | 16..778 | 3815 | 100 | Plus |
| CG34451-RA | 945 | CG34451-RA | 153..915 | 16..778 | 3815 | 100 | Plus |
| CG34451-RB | 1254 | CG34451-RB | 696..1224 | 250..778 | 2645 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:22:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15688975..15689261 | 640..354 | 1435 | 100 | Minus |
| 3L | 28110227 | 3L | 15691662..15691895 | 249..16 | 1170 | 100 | Minus |
| 3L | 28110227 | 3L | 15688774..15688913 | 778..639 | 700 | 100 | Minus |
| 3L | 28110227 | 3L | 15689343..15689450 | 355..248 | 540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:22:38 has no hits.
BS25924.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-02 12:42:24 Download gff for
BS25924.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34451-RA | 154..913 | 17..776 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:56:02 Download gff for
BS25924.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34451-RA | 154..913 | 17..776 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:59:12 Download gff for
BS25924.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34451-RA | 154..913 | 17..776 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:59:12 Download gff for
BS25924.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15689343..15689448 | 250..355 | 100 | <- | Minus |
| 3L | 15691662..15691894 | 17..249 | 100 | | Minus |
| 3L | 15688776..15688911 | 641..776 | 100 | <- | Minus |
| 3L | 15688975..15689259 | 356..640 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:56:02 Download gff for
BS25924.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15681876..15682011 | 641..776 | 100 | <- | Minus |
| arm_3L | 15682075..15682359 | 356..640 | 100 | <- | Minus |
| arm_3L | 15682443..15682548 | 250..355 | 100 | <- | Minus |
| arm_3L | 15684762..15684994 | 17..249 | 100 | | Minus |
BS25924.pep Sequence
Translation from 16 to 777
> BS25924.pep
MIPYNYNSPDTAKYVKRTWGKHCNVLLFVSGDIDGELEPYVPVINSTDTW
TLVQQGLMQAYLFYADQIDWFLRVEPSSFVVLENLRYMIHKRKYQPSQPI
YFGYELENIVTHESFVHHHSGYVISREALRRYTMASKDPENKECTHWEGY
VEGLDIHRCLRFANVTVAESRDEFEHETFLPVTMDYQFLNGYDTIPWLRK
LSYHKRTEKTVPISSRAICFLVEYPPEMYDYYYFVYRLKIFGTPVRNSID
FRP*
BS25924.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:07:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34451-PC | 253 | CG34451-PC | 1..253 | 1..253 | 1386 | 100 | Plus |
| CG34451-PA | 253 | CG34451-PA | 1..253 | 1..253 | 1386 | 100 | Plus |
| CG34451-PB | 166 | CG34451-PB | 1..166 | 88..253 | 913 | 100 | Plus |
| CG34452-PC | 318 | CG34452-PC | 61..302 | 4..245 | 368 | 35 | Plus |
| CG34452-PB | 318 | CG34452-PB | 61..302 | 4..245 | 368 | 35 | Plus |
