BS25926.complete Sequence
1013 bp assembled on 2011-08-02
GenBank Submission: KX805963
> BS25926.complete
GAAGTTATCAGTCGACATGCGTCCCCCAGAGTTCAAGCTTAACAATCCGC
CGGAGGACCTGATCTCCGCTGTGAAATTCGGCCCCAAATCGAATCAATAC
ATGGCGGCGTCTTCTTGGGACGGAACACTTAGATTCTATGATGTGCCGGC
AAACCAGCTGCGTCAGAAATTCGTGCAGGATGCCCCTCTTCTCGACTGTG
CCTTCATGGACATAGTGCACGTGGTCAGTGGCTCCCTGGACAACCAGCTG
CGTCTCTTTGATGTCAACACCCAGGCGGAAAGCATAATTGGTGCCCACGA
GGAGCCCATCAGATGCGTGGAGCACGCCGAGTATGTCAATGGCATCCTCA
CGGGTAGCTGGGACAATACCGTGAAGCTGTGGGACATGCGGGAGAAGCGC
TGCGTTGGAACCTTCGAACAGAACAACGGAAAGGTGTACTCCATGTCCGT
GATCGACGAAAAGATCGTGGTGGCCACCTCCGACCGCAAGGTGCTCATCT
GGGACCTTCGCAAGATGGACAGCTACATCATGAAGCGGGAGTCCTCGCTC
AAGTACCAGACCCGCTGCATTCGTCTATTCCCCAACAAAGAAGGCTACGT
GATGTCCTCCATCGAGGGACGGGTGGCAGTGGAGTACCTGGATCACGATC
CTGAGGTGCAGCGCCGCAAGTTCGCTTTCAAGTGCCACCGGAATAGGGAG
CAGAATATCGAACAGATCTACCCCGTTAATGCCTTGAGTTTCCACAATGT
CTATCAGACGTTCGCCACTGGCGGATCCGATGGCATTGTGAACATTTGGG
ATGGCTTCAACAAGAAGCGCCTTTGTCAGTTCCACGAATACGATACCTCC
ATATCCACGCTCAACTTCAGCTCCGATGGCAGCGCCCTGGCCATCGGCTG
CTCCTACTTGGACCAACTGCCAGAGACGCCGGCTACAGTGCCACATCCGG
CTATCTATATACGCTATCCCACGGACCAGGAAACTAAACAGAAATAAAAG
CTTTCTAGACCAT
BS25926.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:24:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bub3-RB | 981 | CG7581-PB | 1..981 | 17..997 | 4905 | 100 | Plus |
| Bub3-RA | 981 | CG7581-PA | 1..981 | 17..997 | 4905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:24:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bub3-RB | 1362 | CG7581-RB | 114..1094 | 17..997 | 4905 | 100 | Plus |
| Bub3-RA | 1236 | CG7581-RA | 114..1094 | 17..997 | 4905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:24:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29674275..29675064 | 997..208 | 3950 | 100 | Minus |
| 3R | 32079331 | 3R | 29675116..29675308 | 209..17 | 965 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:24:34 has no hits.
BS25926.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-02 12:42:28 Download gff for
BS25926.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bub3-RA | 112..1084 | 17..989 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:57:04 Download gff for
BS25926.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bub3-RA | 114..1086 | 17..989 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:00:05 Download gff for
BS25926.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bub3-RA | 114..1086 | 17..989 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:00:05 Download gff for
BS25926.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29674283..29675063 | 209..989 | 100 | <- | Minus |
| 3R | 29675117..29675308 | 17..208 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:57:04 Download gff for
BS25926.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25500005..25500785 | 209..989 | 100 | <- | Minus |
| arm_3R | 25500839..25501030 | 17..208 | 100 | | Minus |
BS25926.pep Sequence
Translation from 16 to 996
> BS25926.pep
MRPPEFKLNNPPEDLISAVKFGPKSNQYMAASSWDGTLRFYDVPANQLRQ
KFVQDAPLLDCAFMDIVHVVSGSLDNQLRLFDVNTQAESIIGAHEEPIRC
VEHAEYVNGILTGSWDNTVKLWDMREKRCVGTFEQNNGKVYSMSVIDEKI
VVATSDRKVLIWDLRKMDSYIMKRESSLKYQTRCIRLFPNKEGYVMSSIE
GRVAVEYLDHDPEVQRRKFAFKCHRNREQNIEQIYPVNALSFHNVYQTFA
TGGSDGIVNIWDGFNKKRLCQFHEYDTSISTLNFSSDGSALAIGCSYLDQ
LPETPATVPHPAIYIRYPTDQETKQK*
BS25926.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:08:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bub3-PB | 326 | CG7581-PB | 1..326 | 1..326 | 1735 | 100 | Plus |
| Bub3-PA | 326 | CG7581-PA | 1..326 | 1..326 | 1735 | 100 | Plus |
| Rae1-PA | 346 | CG9862-PA | 10..315 | 2..297 | 401 | 32.4 | Plus |
| CG12782-PA | 336 | CG12782-PA | 14..308 | 5..297 | 286 | 27.8 | Plus |
| Gbeta5-PA | 358 | CG10763-PA | 83..348 | 27..294 | 203 | 23.3 | Plus |
