BS25930.complete Sequence
1103 bp assembled on 2011-08-02
GenBank Submission: KX805948
> BS25930.complete
GAAGTTATCAGTCGACATGCCGGAGTTCGTGAGAGTGGCAATTAACGAAA
GCCTTTGGGAGTTCCCGGATATATACGAGTTCGTTCGTTTTCTGGGTGGC
GGTTCCTTTGGCCAGGTGGCTAAGGTGAGACTACGAGGCACTGAAAATTA
CTTCGCTATGAAAAGGCTTATGCGCCCATTCGAGAGGGAGGAGGATGCTA
AGGGTACCTATCGCGAGATCCGTCTGCTGAAGCACATGAATCATCGAAAT
GTTATCAGCCTGCTGAACGTCTTCCATCCACCAGCGCACAACATGATGGA
ATTTCAGCAGGTTTATTTGGTGACTCACCTGATGGACGCGGATTTGCACA
GGTACTCGCGTTCGAAAAGGATGAGCGATCAAGAGATTAGGATAATCCTT
TACCAAATACTGCGGGGACTGAAGTACATACATAGTGCCGGGGTTGTTCA
TCGAGACTTAAAGCCCTGCAATATCGCAGTTAATGGAAATAGCGAGGTGC
GCATACTTGACTTCGGTTTATCCCGTATGTGCGCAGACAAAATGACGGAC
CATGTTGGAACTATGTGGTATCTAGCTCCGGAAATTATCTTTTTAAGGGG
TCAATACACAAAGGCAATTGACGTGTGGTCGGTTGGTTGCATTCTGGCGG
AACTTATCACGGATCGTGTCCTGTTTCGCGGTGAAAACTATGTAAGCCAA
ATACGATGTCTGATTAACATAATGGGTACTCCGACGAGGGAGTTTATCAC
CGGGATAAGCATGGAACGTTCGCGTAATTACCTGGAGGGGTACCCGTTAC
GACAAAGGTGCGATTTTCATCACCTGTTTATGGGTTACGATGTCCAGGCC
ATCGATTTGATGGAAAAAATGCTCGAAATGGTACCCGAAAAACGTATCAC
AGCTGCGGAAGCAATGCTCCATCCATACCTTCGGGATCTTATTGAGCCAC
ACCATCATGCCGAAGACACCGCACCAGTCTATGATCAGAACTTCGAAAAC
ATGGTACTGCCTGTAAAATGCTGGAAAGAACTTGTTTCCCACGAGATTCG
GAACTTCAGACCTGACCAACTTGATTTGCATTTTTAAAAGCTTTCTAGAC
CAT
BS25930.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:24:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
p38c-RA | 1071 | CG33338-PA | 1..1071 | 17..1087 | 5355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:24:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
p38c-RA | 1184 | CG33338-RA | 22..1094 | 17..1089 | 5365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:24:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24149110..24150182 | 1089..17 | 5365 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:24:52 has no hits.
BS25930.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-02 12:42:30 Download gff for
BS25930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
p38c-RA | 22..1090 | 17..1085 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:57:14 Download gff for
BS25930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
p38c-RA | 22..1090 | 17..1085 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:00:15 Download gff for
BS25930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
p38c-RA | 22..1090 | 17..1085 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:00:15 Download gff for
BS25930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24149114..24150182 | 17..1085 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:57:14 Download gff for
BS25930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19974836..19975904 | 17..1085 | 100 | | Minus |
BS25930.pep Sequence
Translation from 16 to 1086
> BS25930.pep
MPEFVRVAINESLWEFPDIYEFVRFLGGGSFGQVAKVRLRGTENYFAMKR
LMRPFEREEDAKGTYREIRLLKHMNHRNVISLLNVFHPPAHNMMEFQQVY
LVTHLMDADLHRYSRSKRMSDQEIRIILYQILRGLKYIHSAGVVHRDLKP
CNIAVNGNSEVRILDFGLSRMCADKMTDHVGTMWYLAPEIIFLRGQYTKA
IDVWSVGCILAELITDRVLFRGENYVSQIRCLINIMGTPTREFITGISME
RSRNYLEGYPLRQRCDFHHLFMGYDVQAIDLMEKMLEMVPEKRITAAEAM
LHPYLRDLIEPHHHAEDTAPVYDQNFENMVLPVKCWKELVSHEIRNFRPD
QLDLHF*
BS25930.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:08:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
p38c-PA | 356 | CG33338-PA | 1..356 | 1..356 | 1893 | 100 | Plus |
p38a-PC | 366 | CG5475-PC | 8..354 | 3..349 | 953 | 52.7 | Plus |
p38a-PB | 366 | CG5475-PB | 8..354 | 3..349 | 953 | 52.7 | Plus |
p38a-PA | 366 | CG5475-PA | 8..354 | 3..349 | 953 | 52.7 | Plus |
p38b-PA | 365 | CG7393-PA | 5..353 | 1..349 | 941 | 50.7 | Plus |