BS25935.complete Sequence
1202 bp assembled on 2011-08-02
GenBank Submission: KX800366
> BS25935.complete
GAAGTTATCAGTCGACATGGTGGACTACAGCAAGTGGAAGAACATCGAGA
TTTCGGATGATGAGGACGACACTCACCCGAACATAGACACGCCTTCTCTG
TTCCGCTGGCGGCACCAGGCGCGCGTGGAGCGCATGGCGGAGATGGACCA
CGAGAAGGACGAGCTTAAGAAAAAGCGCCAGAGCTACCAGGCGCGCCTCA
TGGACGTCAAGGAGCGGATCTCAAAGAAGGATGGCGACGAGGAGGCCCTG
AAGAAAGAGCTCGAAAAGATCGAGGCCGAGGGCAAAGAGCTGGACCGCAT
CGAGAGCGAGATGATTAAGAAGGAAAAGAAAACACCCTGGAACGTGGACA
CCATCAGCAAGCCCGGCTTTGAGAAGACCGTAATCAACAAGAAGGCCGGC
CGCAAGCCGGATGAGAATCTGTCCGAGGAAGAGCGAGAGCAGCGCATGAA
GCAATTCGTCAAGGAGAACGAGAAGCTCTGCCAACAGTATGGCATGCTGC
GCAAGTACGACGATTCGAAGCGGTTTCTGCAGGAGCATCTTCACTTGGTG
GGCGAGGAGACGGCCAACTACCTAGTCATTTGGTCCATCAATCTGGAAAT
GGAGGAGAAGCACGAGCTGATGGCCCACGTGGCGCATCAGTGCATTTGCA
TGCAGTACATTCTAGAGTTGGCCAAACAGCTGGACGTGGATCCTCGCGCC
TGTGTCAGCTCCTTCTTCTCAAAGATCCAGCACTGTCATCCCGAGTACCG
CGCGCAGTTCGACAGCGAGATCGAAGGTTTCAAAGGACGTATCCAGAAGC
GTGCGCAGGAGAAGATCCAGGAGGCGATAGCCCAGGCCGAAGAGGAGGAG
CGCAAGGAGCGCCTCGGACCTGGTGGTCTGGACCCAGCCGATGTCTTTGA
ATCCCTGCCCGATGAACTAAAGGCCTGTTTCGAGTCCCGCGACGTAGAGC
TGCTGCAGAAGACCATTGCGGCCATGCCCGTGGACGTCGCCAAGCTGCAC
ATGAAGCGTTGTGTGGACTCTGGTCTCTGGGTGCCCAATGCCGCTGACTT
GGAGGGTGACAAGAAGGAGGAAGATGACTCGGATGACGTCGCCGGTGGCG
AGGAGAAGACCGACGATGCCAAATCAGAGAGTGCAGCCAAGGAGGAGCCC
ATCTACACTGGCGTCAGCACCGAGGACGTTGACTGAAAGCTTTCTAGACC
AT
BS25935.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:24:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cdc37-RA | 1170 | CG12019-PA | 1..1170 | 17..1186 | 5805 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:24:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cdc37-RA | 1611 | CG12019-RA | 309..1478 | 17..1186 | 5805 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:24:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1796176..1796838 | 252..914 | 3285 | 99.7 | Plus |
| 3L | 28110227 | 3L | 1796902..1797174 | 914..1186 | 1365 | 100 | Plus |
| 3L | 28110227 | 3L | 1795791..1795996 | 48..253 | 1015 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:24:17 has no hits.
BS25935.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-02 12:42:28 Download gff for
BS25935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdc37-RA | 275..1443 | 17..1185 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:56:54 Download gff for
BS25935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdc37-RA | 309..1477 | 17..1185 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:59:57 Download gff for
BS25935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdc37-RA | 309..1477 | 17..1185 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:59:57 Download gff for
BS25935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1795700..1795732 | 17..49 | 100 | -> | Plus |
| 3L | 1795793..1795996 | 50..253 | 99 | -> | Plus |
| 3L | 1796178..1796837 | 254..913 | 99 | -> | Plus |
| 3L | 1796902..1797173 | 914..1185 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:56:54 Download gff for
BS25935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1795793..1795996 | 50..253 | 99 | -> | Plus |
| arm_3L | 1796902..1797173 | 914..1185 | 100 | | Plus |
| arm_3L | 1795700..1795732 | 17..49 | 100 | -> | Plus |
| arm_3L | 1796178..1796837 | 254..913 | 99 | -> | Plus |
BS25935.pep Sequence
Translation from 16 to 1185
> BS25935.pep
MVDYSKWKNIEISDDEDDTHPNIDTPSLFRWRHQARVERMAEMDHEKDEL
KKKRQSYQARLMDVKERISKKDGDEEALKKELEKIEAEGKELDRIESEMI
KKEKKTPWNVDTISKPGFEKTVINKKAGRKPDENLSEEEREQRMKQFVKE
NEKLCQQYGMLRKYDDSKRFLQEHLHLVGEETANYLVIWSINLEMEEKHE
LMAHVAHQCICMQYILELAKQLDVDPRACVSSFFSKIQHCHPEYRAQFDS
EIEGFKGRIQKRAQEKIQEAIAQAEEEERKERLGPGGLDPADVFESLPDE
LKACFESRDVELLQKTIAAMPVDVAKLHMKRCVDSGLWVPNAADLEGDKK
EEDDSDDVAGGEEKTDDAKSESAAKEEPIYTGVSTEDVD*
BS25935.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:08:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cdc37-PA | 389 | CG12019-PA | 1..389 | 1..389 | 2033 | 100 | Plus |
