BS25965.complete Sequence
1766 bp assembled on 2011-08-23
GenBank Submission: KX803359
> BS25965.complete
GAAGTTATCAGTCGACATGCGTTCTCGCAGCAATTCGGGCGTCCGTTTGG
ACTACTATCAGCGCATTGTGCATCGTCTGATCCTGGCCCACCAGGAACCG
GTCACCGGTCTGTTTCCCGCCTCGAATGTGAACTCGCACGCCTGGATCAG
GGACAATGTGTACTGCATCTTGGCCGTTTGGGGCTTGTCCATGGCGTACA
AGAAGATTGCCGATCAGGACGAGGATCGGGCCAAATGCTATGAGCTGGAG
CAGAGCTGTGTAAAGCTAATGCGTGGCCTGCTCATGGCCATGATGAACCA
GAAGGACAAGGTAGAGAAGTTCAAGATGACCCAGAGCCCGTACGATTCGC
TGCACGCCAAGTATTCCAGCAAGAACGGCTTGCCCGTGGTCGATGACAAT
GAGTGGGGTCATCTGCAGATCGATGCCGTGTCCCTGTACCTGCTGATCCT
GGCCCAGATGACGGCCTCCGGCCTGCAGATCGTCTTCTCCCTGGACGAGG
TGTCATTCATCCAGAATCTGGTCTTCTACATCGAGTCAGCGTACTCGATT
CCCGACTATGGCATTTGGGAGCGCGGCGATAAAACCAATCATGGTGAACC
CGAGCTGAATGCCAGCTCCATTGGCATGGCCAAGGCGGCGCTGGAGGCCA
TGAACGAGCTGGATCTGTTCGGAGCCCGTGGCGGTCCGGCTAGTGTCATC
CATGTGCTGGCCGACGAGGCCCACAAATGCCAGGCGGTGCTGCAGTCGAT
GCTGCCGCGCGAGTCGAATAGCAAGGAATTGGATTCCGGTCTGCTGTGCG
TCATCGGCTTTCCCGCCTTTGCTGTGGACGATGCCCAGCTGATACACAAC
ACCAAGGATGCCATTCTATCCCGTCTGCAGGGCAAGTACGGCTGCAAGAG
ATTCTTGCGCGATGGCTATCGCACACCGAAGGAGGATCCCTCGAGGCTAT
ACTACGAGCGCTGGGAGCTGCGCATGTTCGAGAACATCGAGTGCGAGTGG
CCGCTATTCTACTGCTACCTAATCCTGTTCCACGCCTTCCAGAGCGACAA
GCGGGCGGTGGAGGAGTACGCCAGCCGTTTGGAGAAGATCATGGTGCGTT
CGGAAGATGGCATTCTACTTGTTCCCGAGAGCTATGCAGTGCCGCAGGAT
CTGGTGGGCTTCGAGTATCAGAAGCCGGGATCGCAGGTCCGCGAAGTGGT
CGGCCGGTGTCCGTTCCTCTGGGGCCAGTCCCTATTCATCCTCGGCAGAT
TGCTGCAGGAGGGTTTCCTGGCTGTGGGCGAATTGGATCCATTGAATCGT
CGCCTGGGCGCTCAAAAGAAGCCGGACGTCGTCGTCCAAGTGGTCATCAT
TGCCGAGGACAACGAAATCCGCGACAAGCTGGCCGAACACGATCTGCACG
TGCAGACGATCGCAGAGGTGGCGCCCATTGAGGTGCAGCCCGCCCGAGTT
CTGAGTCATCTGTACACCTATTTGGGACGCAATCGGAAATTGGGTTTGAG
CGGCAGAAAGTCACGTGATGTGGGCATCCTTAGCACCAGTAAGCTTTACT
CGCTTAAGGATCGCATATTTGCCTTCACGCCGCAGCATATCGACTATGAA
GAATATTATACAACACGCGATCCCGATTTGCTTGCCAGCAATTTTACCAC
AAATTTAGCATTCTTGACCAACAATTGGCGTCACATGTTGGGCAGGCCGA
CAATCACACTAATGGCAACCCACTATATGCTAGGTAACTACCCGAAATAA
AAGCTTTCTAGACCAT
BS25965.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:52:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7766-RI | 3633 | CG7766-PI | 1..1717 | 17..1733 | 8585 | 100 | Plus |
| CG7766-RH | 4077 | CG7766-PH | 1..1717 | 17..1733 | 8585 | 100 | Plus |
| CG7766-RG | 4017 | CG7766-PG | 1..1717 | 17..1733 | 8585 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:52:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7766-RI | 4588 | CG7766-RI | 325..2041 | 17..1733 | 8585 | 100 | Plus |
| CG7766-RH | 5032 | CG7766-RH | 325..2041 | 17..1733 | 8585 | 100 | Plus |
| CG7766-RG | 4972 | CG7766-RG | 325..2041 | 17..1733 | 8585 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:51:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9101565..9102234 | 1262..593 | 3350 | 100 | Minus |
| X | 23542271 | X | 9102491..9103071 | 597..17 | 2905 | 100 | Minus |
| X | 23542271 | X | 9101096..9101421 | 1585..1260 | 1630 | 100 | Minus |
| X | 23542271 | X | 9099295..9099464 | 1752..1583 | 850 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:51:59 has no hits.
BS25965.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-23 09:34:49 Download gff for
BS25965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7766-RF | 309..2040 | 17..1748 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:03:44 Download gff for
BS25965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7766-RG | 325..2049 | 17..1741 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:33:15 Download gff for
BS25965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7766-RG | 325..2049 | 17..1741 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:33:15 Download gff for
BS25965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9099299..9099461 | 1586..1748 | 100 | <- | Minus |
| X | 9101096..9101419 | 1262..1585 | 100 | <- | Minus |
| X | 9101566..9102233 | 594..1261 | 100 | <- | Minus |
| X | 9102495..9103071 | 17..593 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:03:44 Download gff for
BS25965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8993332..8993494 | 1586..1748 | 100 | <- | Minus |
| arm_X | 8995129..8995452 | 1262..1585 | 100 | <- | Minus |
| arm_X | 8995599..8996266 | 594..1261 | 100 | <- | Minus |
| arm_X | 8996528..8997104 | 17..593 | 100 | | Minus |
BS25965.pep Sequence
Translation from 16 to 1749
> BS25965.pep
MRSRSNSGVRLDYYQRIVHRLILAHQEPVTGLFPASNVNSHAWIRDNVYC
ILAVWGLSMAYKKIADQDEDRAKCYELEQSCVKLMRGLLMAMMNQKDKVE
KFKMTQSPYDSLHAKYSSKNGLPVVDDNEWGHLQIDAVSLYLLILAQMTA
SGLQIVFSLDEVSFIQNLVFYIESAYSIPDYGIWERGDKTNHGEPELNAS
SIGMAKAALEAMNELDLFGARGGPASVIHVLADEAHKCQAVLQSMLPRES
NSKELDSGLLCVIGFPAFAVDDAQLIHNTKDAILSRLQGKYGCKRFLRDG
YRTPKEDPSRLYYERWELRMFENIECEWPLFYCYLILFHAFQSDKRAVEE
YASRLEKIMVRSEDGILLVPESYAVPQDLVGFEYQKPGSQVREVVGRCPF
LWGQSLFILGRLLQEGFLAVGELDPLNRRLGAQKKPDVVVQVVIIAEDNE
IRDKLAEHDLHVQTIAEVAPIEVQPARVLSHLYTYLGRNRKLGLSGRKSR
DVGILSTSKLYSLKDRIFAFTPQHIDYEEYYTTRDPDLLASNFTTNLAFL
TNNWRHMLGRPTITLMATHYMLGNYPK*
BS25965.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:17:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7766-PI | 1210 | CG7766-PI | 1..572 | 1..572 | 2982 | 100 | Plus |
| CG7766-PH | 1358 | CG7766-PH | 1..572 | 1..572 | 2982 | 100 | Plus |
| CG7766-PG | 1338 | CG7766-PG | 1..572 | 1..572 | 2982 | 100 | Plus |
| CG7766-PB | 1248 | CG7766-PB | 1..572 | 1..572 | 2982 | 100 | Plus |
| CG7766-PD | 1227 | CG7766-PD | 1..565 | 1..566 | 2771 | 94.7 | Plus |
