BS25987.complete Sequence
1940 bp assembled on 2011-08-23
GenBank Submission: KX806095
> BS25987.complete
GAAGTTATCAGTCGACATGAGCCCCTTCGGCTCCAAGAAAAACCGATCCC
TGTCGGTGCGGGTGAGCACCTTCGACTCGGAGCTGGAGTTCAAGCTGGAG
CCGCGCGCCTCCGGCCAGGATCTGTTCGACCTGGTGTGCCGCACCATCGG
GCTGCGCGAGTCTTGGTACTTTGGGCTGCAGTACGTCGACACCCGCAGCA
ACGTGTCCTGGCTGAAAATGGAGAAGCGGGTGCGCGACCAGCGCGTTGAG
CTGCACGCTAGCAATAATGTGTATGTGTTTAGCTTCTACGCCAAGTTCTT
TCCGGAGAACGTCAGCGAGGAGCTGATCCAGGAGATCACGCAGCACCTGT
TCTTCCTGCAGGTCAAGCAGAGCATCCTCTCCATGGACATCTACTGCCGC
CCGGAGGCGTCCGTGCTGCTGGCCTCCTACGCGGTGCACGTGCAATACGG
TCCGTACGACTACGAGACCTACAAGGACGGTATGCTGGCCGGGGGTGAGC
TTCTGCCCAAGGGAGTGACCGATCAGTACCAGATGACGCCCGAAATGTGG
GAGGAACGGATCAAGACATGGTACATGGACCATGAGCCCATGACGCGCGA
CGAGGTGGAGATGGAGTACCTGAAGATTGCTCAGGACCTGGACATGTACG
GAGTAAACTACTTTCCTATTACGAATAAGAACAAAACCAAATTGTGGCTG
GGCGTCACCTCCGTGGGCCTAAACATCTACGATGAGCGCGATAAGCTAAC
GCCAAAGACAACGTTCCAGTGGAACGAGATACGGCACGTCAGCTTCGACG
ACAAGAAGTTCACCATTCGCCTGGTGGATGCCAAGGTTTCGAATTTCATC
TTTTACTCGCAGGACCTCCACATCAACAAAATGATTCTTGACCTGTGCAA
GGGCAATCACGATCTATATATGCGCCGCCGCAAACCCGACACCATGGAAA
TCCAGCAGATGAAGGCCCAAGCCAAGGAGGAGAAGCAACGCCGCCAGATC
GAACGCAAAAAGTTCATCAGGGAAAAGAAGCTGCGCGAAAAGGCGGAGCA
CGAGCGCTACGAGCTGGAGAAGAGCATGGAGCACCTGCAAAACGAAATGC
GCATGGCCAACGATGCACTTCGGCGTTCCGAAGAGACCAAGGAGCTGTAC
TTCGAAAAGAGTCGTGTCAACGAGGAGCAGATGCAGCTGACCGAGTGCAA
GGCAAACCACTTCAAGACGGAAATGGACCGGCTGCGCGAGCGACAAATGA
AAATCGAGCGGGAGAAGCACGACCTGGAGAAGAAGATTCGCGACGCCGAC
TTCTATGTCCACCAGCTGACGGTGGAGAACGACAAGCGGGAGGCCGAGAC
TGAGAAGCTGCGCAAGGAGCTGATCTGCGCCAAAATGGCGGAGCGCGAGG
CCACCGCTCGCCTGCTCGAATTCCTCAACAGCGGCCGCAAGTCCTCCACG
GATAGCCTGCTGACCGCCTCCAGTGTGTCGCACGCGGCGAATACGGCGTC
CAGCATGGCGGCCATCAGCACACCCTCCCTGATCACAAGCAGCTCAACCA
ATGATTTGGAGACCGCCGGCGGCGCCGAGCTGACCACCCACTCGTCACAC
TACCTGGTCCAAGGTGACAACTCCAGCGGCATTTCGGACGACTTCGAGCC
CAAGGAGTTCATACTCACCGACAACGAGATGGAGCAGATCACCAATGAGA
TGGAGCGCAACCACCTCGACTACCTGCGCAACTCCAAGCAGGTGCAAAGT
CAACTGCAGACACTGCGCTCCGAGATCGCGCCGCACAAGATTGAGGAGAA
CCAGAGCAACCTGGACATCCTCAGCGAGGCGCAGATCAAGGCCGGCGAAA
ATAAATACTCCACGCTCAAGAAACTCAAGTCCGGCTCGACCAAGGCGCGT
GTCGCCTTCTTCGAGGAGCTCTGAAAGCTTTCTAGACCAT
BS25987.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 02:03:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mer-RB | 1908 | CG14228-PB | 1..1908 | 17..1924 | 9540 | 100 | Plus |
| Mer-RA | 1908 | CG14228-PA | 1..1908 | 17..1924 | 9540 | 100 | Plus |
| Moe-RL | 1737 | CG10701-PL | 824..942 | 867..985 | 205 | 78.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:03:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mer-RB | 3400 | CG14228-RB | 358..2265 | 17..1924 | 9540 | 100 | Plus |
| Mer-RA | 2503 | CG14228-RA | 358..2265 | 17..1924 | 9540 | 100 | Plus |
| Moe-RL | 2528 | CG10701-RL | 1291..1409 | 867..985 | 205 | 78.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 02:02:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19690832..19691635 | 1924..1121 | 4020 | 100 | Minus |
| X | 23542271 | X | 19692301..19692957 | 673..17 | 3285 | 100 | Minus |
| X | 23542271 | X | 19691698..19691935 | 1120..883 | 1190 | 100 | Minus |
| X | 23542271 | X | 19692032..19692242 | 883..673 | 1055 | 100 | Minus |
| X | 23542271 | X | 8875114..8875232 | 985..867 | 205 | 78.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 02:02:59 has no hits.
BS25987.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-23 09:34:58 Download gff for
BS25987.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mer-RA | 356..2262 | 17..1923 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:08:12 Download gff for
BS25987.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mer-RA | 358..2264 | 17..1923 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:36:34 Download gff for
BS25987.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mer-RA | 358..2264 | 17..1923 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:36:34 Download gff for
BS25987.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19690833..19691635 | 1121..1923 | 100 | <- | Minus |
| X | 19691698..19691934 | 884..1120 | 100 | <- | Minus |
| X | 19692032..19692241 | 674..883 | 100 | <- | Minus |
| X | 19692301..19692957 | 17..673 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:08:12 Download gff for
BS25987.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19585731..19585967 | 884..1120 | 100 | <- | Minus |
| arm_X | 19586065..19586274 | 674..883 | 100 | <- | Minus |
| arm_X | 19584866..19585668 | 1121..1923 | 100 | <- | Minus |
| arm_X | 19586334..19586990 | 17..673 | 100 | | Minus |
BS25987.pep Sequence
Translation from 16 to 1923
> BS25987.pep
MSPFGSKKNRSLSVRVSTFDSELEFKLEPRASGQDLFDLVCRTIGLRESW
YFGLQYVDTRSNVSWLKMEKRVRDQRVELHASNNVYVFSFYAKFFPENVS
EELIQEITQHLFFLQVKQSILSMDIYCRPEASVLLASYAVHVQYGPYDYE
TYKDGMLAGGELLPKGVTDQYQMTPEMWEERIKTWYMDHEPMTRDEVEME
YLKIAQDLDMYGVNYFPITNKNKTKLWLGVTSVGLNIYDERDKLTPKTTF
QWNEIRHVSFDDKKFTIRLVDAKVSNFIFYSQDLHINKMILDLCKGNHDL
YMRRRKPDTMEIQQMKAQAKEEKQRRQIERKKFIREKKLREKAEHERYEL
EKSMEHLQNEMRMANDALRRSEETKELYFEKSRVNEEQMQLTECKANHFK
TEMDRLRERQMKIEREKHDLEKKIRDADFYVHQLTVENDKREAETEKLRK
ELICAKMAEREATARLLEFLNSGRKSSTDSLLTASSVSHAANTASSMAAI
STPSLITSSSTNDLETAGGAELTTHSSHYLVQGDNSSGISDDFEPKEFIL
TDNEMEQITNEMERNHLDYLRNSKQVQSQLQTLRSEIAPHKIEENQSNLD
ILSEAQIKAGENKYSTLKKLKSGSTKARVAFFEEL*
BS25987.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:17:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mer-PB | 635 | CG14228-PB | 1..635 | 1..635 | 3267 | 100 | Plus |
| Mer-PA | 635 | CG14228-PA | 1..635 | 1..635 | 3267 | 100 | Plus |
| Moe-PD | 575 | CG10701-PD | 4..575 | 10..635 | 1126 | 39.6 | Plus |
| Moe-PI | 575 | CG10701-PI | 4..575 | 10..635 | 1126 | 39.6 | Plus |
| Moe-PH | 575 | CG10701-PH | 4..575 | 10..635 | 1126 | 39.6 | Plus |
