BS26008.complete Sequence
506 bp assembled on 2011-09-14
GenBank Submission: KX803832
> BS26008.complete
GAAGTTATCAGTCGACATGGTGCGATTCGAGACAAGGGACGGCCGTACGA
TAAGCGTAAATCTGGCTCTGCTCGAGAAATCCTTGGTGATCCGGGAGATG
TGCCGCGTTGGCCAGGTCCCAGAGGATGAGGACTTCGTCCTGCCGCTGCA
CGGTATACACAGCAATGTCCTGCTGAAGATCTTGCTGTGGGCTGAGTACC
ATGAGAAACACGAAGAGCCCGCCTGGGTGGACAGCAAAGATCCTCTTCCG
GCCGAGGAGATTGAGCTGCAGATCTCCGATTGGGACAAGGAGTTCCTGCG
CGTGGAAATCGATAGCATTTGCAAAATCATGGAGGGCTGCAACTACTTGG
ACATCCCTTGGCTCTACAAGCTCTGTGCCCAGAAACTCGTCTTCCTCAGC
AGCCGAGAGCCGGAGACGCAGTTCAGCGGTTACGTGGAGAAGATCCCAAG
ATTCCAGGATCATTTCATTGAGCAAATTCAAAAGGAATAGAAGCTTTCTA
GACCAT
BS26008.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:28:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15800-RA | 474 | CG15800-PA | 1..474 | 17..490 | 2355 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:28:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15800-RA | 614 | CG15800-RA | 36..509 | 17..490 | 2355 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:28:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23790719..23791192 | 490..17 | 2355 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:28:02 has no hits.
BS26008.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-14 12:05:35 Download gff for
BS26008.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15800-RA | 1..474 | 17..490 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:15:49 Download gff for
BS26008.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15800-RA | 36..509 | 17..490 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:11:14 Download gff for
BS26008.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15800-RA | 36..509 | 17..490 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:11:14 Download gff for
BS26008.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23790719..23791192 | 17..490 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:15:49 Download gff for
BS26008.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19678242..19678715 | 17..490 | 99 | | Minus |
BS26008.pep Sequence
Translation from 16 to 489
> BS26008.pep
MVRFETRDGRTISVNLALLEKSLVIREMCRVGQVPEDEDFVLPLHGIHSN
VLLKILLWAEYHEKHEEPAWVDSKDPLPAEEIELQISDWDKEFLRVEIDS
ICKIMEGCNYLDIPWLYKLCAQKLVFLSSREPETQFSGYVEKIPRFQDHF
IEQIQKE*
BS26008.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:17:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15800-PA | 157 | CG15800-PA | 1..157 | 1..157 | 833 | 100 | Plus |
| SkpD-PA | 158 | CG12700-PA | 6..135 | 2..133 | 161 | 30.8 | Plus |
| SkpF-PA | 171 | CG12227-PA | 3..112 | 1..114 | 157 | 27.7 | Plus |
| SkpC-PA | 158 | CG11941-PA | 6..135 | 2..133 | 155 | 28.6 | Plus |
| SkpA-PI | 162 | CG16983-PI | 4..132 | 2..133 | 155 | 26.3 | Plus |
