BS26011.complete Sequence
647 bp assembled on 2011-08-02
GenBank Submission: KX804683
> BS26011.complete
GAAGTTATCAGTCGACATGGAACTCCTCAACGAATCTGCTCCGAATCCGC
TTGCCAAGACGCCGAAAAGTGGCATGTCCACGGGCGGCAAGATCCTGATA
GCAGCAACGGGCGGAGTAGGTATCGGTCTGTCGATTGTGTGCGCCTCCTT
TGTGGCGCCTGCATTCCGGAGGATTTGCTTGCCTTATGTGCCAGCGACGA
CCGAGCAAATACAGAACGTTCTCAGCTTCCTGCCCAAGAATTCGGCCGGA
AAACTGCTGGACATTGGATCCGGCGACGGACGGATTGTAGTGGCTGCGGC
ACAGCATTGTGGTGCTCTAAAAGCAGATGGCGTGGAGCTAAACCCATGGC
TGGTCTACTACTCGCGCCTGGCCGCGCTGCGTCACAGCGTTTCCAAACGG
ACGAGATTTTTTCGGCGAGATCTCTGGAAGTTCGATATAAAGGACTACAA
CTTCGTGGTCATTTTTGGGGTTGAGCAGATGATGCAAGATCTAGAACACA
AACTCATTGCTGAGTGTCCGCACAACACCAAGATTATCGCCTGCCGCTTT
CCACTACCCAGCCTAGAGCACGTGAAGATTATAGAGGACGGAGTAAACAC
CGTCTGGTTCTACGACCTGAACAAAAGCTAGAAGCTTTCTAGACCAT
BS26011.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:34:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3337-RB | 615 | CG3337-PB | 1..615 | 17..631 | 3075 | 100 | Plus |
| CG3337-RA | 615 | CG3337-PA | 1..615 | 17..631 | 3075 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:34:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3337-RB | 2819 | CG3337-RB | 52..666 | 17..631 | 3075 | 100 | Plus |
| CG3337-RA | 708 | CG3337-RA | 52..666 | 17..631 | 3075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:34:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21222857..21223195 | 631..293 | 1695 | 100 | Minus |
| 3R | 32079331 | 3R | 21223257..21223533 | 293..17 | 1385 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:34:36 has no hits.
BS26011.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-02 12:42:47 Download gff for
BS26011.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3337-RA | 52..666 | 17..631 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:02:34 Download gff for
BS26011.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3337-RA | 52..666 | 17..631 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:04:50 Download gff for
BS26011.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3337-RA | 52..666 | 17..631 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:04:50 Download gff for
BS26011.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21222857..21223194 | 294..631 | 100 | <- | Minus |
| 3R | 21223257..21223533 | 17..293 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:02:34 Download gff for
BS26011.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17048579..17048916 | 294..631 | 100 | <- | Minus |
| arm_3R | 17048979..17049255 | 17..293 | 100 | | Minus |
BS26011.pep Sequence
Translation from 16 to 630
> BS26011.pep
MELLNESAPNPLAKTPKSGMSTGGKILIAATGGVGIGLSIVCASFVAPAF
RRICLPYVPATTEQIQNVLSFLPKNSAGKLLDIGSGDGRIVVAAAQHCGA
LKADGVELNPWLVYYSRLAALRHSVSKRTRFFRRDLWKFDIKDYNFVVIF
GVEQMMQDLEHKLIAECPHNTKIIACRFPLPSLEHVKIIEDGVNTVWFYD
LNKS*
BS26011.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:10:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3337-PB | 204 | CG3337-PB | 1..204 | 1..204 | 1065 | 100 | Plus |
| CG3337-PA | 204 | CG3337-PA | 1..204 | 1..204 | 1065 | 100 | Plus |
