Clone BS26012 Report

Search the DGRC for BS26012

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:260
Well:12
Vector:pDNR-Dual
Associated Gene/Transcriptrev7-RA
Protein status:BS26012.pep: gold
Sequenced Size:709

Clone Sequence Records

BS26012.complete Sequence

709 bp assembled on 2011-08-02

GenBank Submission: KX804155

> BS26012.complete
GAAGTTATCAGTCGACATGCAGGCGGAGATTAAGGCCGACATCATCGTGG
AGGCGATGGAGGTGCTAGTGAATCACATTCTATACGTGCGCGGTATATAC
CCCTCGCACATTTTTAAAATGAAGCGGATGTACAACTCGCCCATCTATGT
GTCCATATTTCCACCGCTTAATAACTACCTGGCCGGCGTCCTAAAATCCG
CACAAGAACTTCTTCGCCGCCGGGAGCTGCAGTGCCTGGAGCTAATAGTG
TATCAGAAGGAGAATGAGAAGTTGGAGAGCTATAAAATGCAACTAGAAAC
CCAGAGGAGTGGCCTACCGGCAGAGGATCATTTGATGGAGTTCGAGCAGA
ACATGCGCTCTGTCATCTACAAAATCTCTCAGCGCTTAAACCAGGCGCCT
AAACTGCCCGCCGGAAGTTGTCAGTTTAAGGTGCATCTGCACACTACCCA
GGAGGCATTCATCCGCTTCAGCCATGACTCCCAGTACCAGGAGTTTCCCT
GGCTTCAGACCCAAAAAACTGAATCCCAAGCGACAGGGCGAACCGTTTAC
CTCCTTCCTTTGGCTAGGGTAGATGATTTGGGACTGAAAATGGATGTCCT
CATCGTTAATTAAAAGCTTTCTAGACCATTCGTTTGGCGCGCGAACGGCG
GGTAAGTGGTCGATAATCATAATTCAATAATCGATAATTCAATAAATCCA
ACCAAATTC

BS26012.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:34:57
Subject Length Description Subject Range Query Range Score Percent Strand
rev7-RA 597 CG2948-PA 1..597 17..613 2985 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:34:58
Subject Length Description Subject Range Query Range Score Percent Strand
rev7-RA 831 CG2948-RA 67..667 13..613 2990 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:34:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5588939..5589539 13..613 2990 99.8 Plus
Blast to na_te.dros performed on 2014-11-26 22:34:56 has no hits.

BS26012.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-02 12:42:47 Download gff for BS26012.complete
Subject Subject Range Query Range Percent Splice Strand
rev7-RA 71..671 17..619 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:02:44 Download gff for BS26012.complete
Subject Subject Range Query Range Percent Splice Strand
rev7-RA 71..671 17..619 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:04:58 Download gff for BS26012.complete
Subject Subject Range Query Range Percent Splice Strand
rev7-RA 71..671 17..619 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:04:58 Download gff for BS26012.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5588943..5589540 17..618 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:02:44 Download gff for BS26012.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1414665..1415262 17..618 99 -> Plus

BS26012.pep Sequence

Translation from 16 to 612

> BS26012.pep
MQAEIKADIIVEAMEVLVNHILYVRGIYPSHIFKMKRMYNSPIYVSIFPP
LNNYLAGVLKSAQELLRRRELQCLELIVYQKENEKLESYKMQLETQRSGL
PAEDHLMEFEQNMRSVIYKISQRLNQAPKLPAGSCQFKVHLHTTQEAFIR
FSHDSQYQEFPWLQTQKTESQATGRTVYLLPLARVDDLGLKMDVLIVN*

BS26012.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:10:38
Subject Length Description Subject Range Query Range Score Percent Strand
rev7-PA 198 CG2948-PA 1..198 1..198 1014 100 Plus