BS26025.complete Sequence
995 bp assembled on 2011-08-02
GenBank Submission: KX801626
> BS26025.complete
GAAGTTATCAGTCGACATGGCACAGGAGACGAAGACCGTGGCGACAGCCA
AAGACCAGAACCAACGAGACCATATCGACGAGGAAGAAGTCATCGAACTC
CACGAGTCACGCAGCTTTTACGATCGGGTTCGCGAACAGGCGGAGCGATT
TGCTAGCACACGAGTTGGCCAATTCGTGATCGAACGGGCTGATAAAGCGC
TGGCCATGATCGAGGATACTGCCAAGTGGAGTCTTCCGCAAGACAAGTCT
TCTGCTCCCTTGGAACGCCCCCTGCCTTGGGCTCCATTCCTGATGCTCAT
CGTCCTGCTGCGGCTCACACGCATTTGGTTATCGGTTGGCGCCCTGATGA
TCGGCAATGGTCCAATATCTCCTACGGATATGGTATACTTTATACAGACT
AGACGCCGCAAGCTGCGGGCCATTCGGGTTCATGGCCTAAAGGTGATGAG
ACGGCGCCAGCAGGAGGTGTCCTATGGCAGTGGCAAGGGTATGACCCAGA
AGCTCAATCAGTGGTTTTCCCGAGCCATGTGCCGTCCAGGAGTTCAGCAG
GATAGCAGCAGTCGCCGGGTGTTTGTCCGCCATTCGGAGCAGGGTTTAAG
CAATTTCGTAGTTAAGCGCCCTCGAGAGGAGGACTGCAATGCCGATGCCG
ACCTGACCATCGACCAAATGCTGGCCAAGTATGCCAACGAGAATTCCGAA
GATGACTCCGACTTTGTGCCCAATGAGGAGGAGGAGGAGGAGGAAAGCAG
CAGCAGCAGCGGGGAAAGCGAATCCGAATCCGGCTCCAGCGAAGGAATAA
GCAGCGGCGAGGTGGATGAGGTTGTCAGCCAGCCCAAGCAGAAGTCAGCT
GGAGCGGTGGTGGAAAACGGAGTGCACAAGGCCGAGGAGAAGGAAAATGA
TAAGGGAAAACTGAACATAACGACAACCAGCAATGGCAACAACGACAAGG
AGCAGGCGGATGTTGGTAATGGACATTGAAAGCTTTCTAGACCAT
BS26025.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:49:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jabba-RB | 963 | CG42351-PB | 1..963 | 17..979 | 4815 | 100 | Plus |
| Jabba-RI | 1221 | CG42351-PI | 1..951 | 17..967 | 4755 | 100 | Plus |
| Jabba-RG | 1317 | CG42351-PG | 1..949 | 17..965 | 4745 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jabba-RB | 1323 | CG42351-RB | 229..1192 | 17..980 | 4820 | 100 | Plus |
| Jabba-RI | 1567 | CG42351-RI | 229..1179 | 17..967 | 4755 | 100 | Plus |
| Jabba-RG | 1663 | CG42351-RG | 229..1177 | 17..965 | 4745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18758943..18759295 | 593..241 | 1765 | 100 | Minus |
| 2R | 25286936 | 2R | 18758641..18758883 | 832..590 | 1215 | 100 | Minus |
| 2R | 25286936 | 2R | 18759387..18759612 | 242..17 | 1130 | 100 | Minus |
| 2R | 25286936 | 2R | 18758436..18758585 | 980..831 | 750 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:49:17 has no hits.
BS26025.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-02 12:42:53 Download gff for
BS26025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42351-RB | 219..1180 | 17..978 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:35:13 Download gff for
BS26025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jabba-RB | 229..1190 | 17..978 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:10:40 Download gff for
BS26025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jabba-RB | 229..1190 | 17..978 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:10:40 Download gff for
BS26025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18758438..18758583 | 833..978 | 100 | <- | Minus |
| 2R | 18758641..18758880 | 593..832 | 100 | <- | Minus |
| 2R | 18758944..18759293 | 243..592 | 100 | <- | Minus |
| 2R | 18759387..18759612 | 17..242 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:35:13 Download gff for
BS26025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14646892..14647117 | 17..242 | 100 | | Minus |
| arm_2R | 14645943..14646088 | 833..978 | 100 | <- | Minus |
| arm_2R | 14646146..14646385 | 593..832 | 100 | <- | Minus |
| arm_2R | 14646449..14646798 | 243..592 | 100 | <- | Minus |
BS26025.pep Sequence
Translation from 16 to 978
> BS26025.pep
MAQETKTVATAKDQNQRDHIDEEEVIELHESRSFYDRVREQAERFASTRV
GQFVIERADKALAMIEDTAKWSLPQDKSSAPLERPLPWAPFLMLIVLLRL
TRIWLSVGALMIGNGPISPTDMVYFIQTRRRKLRAIRVHGLKVMRRRQQE
VSYGSGKGMTQKLNQWFSRAMCRPGVQQDSSSRRVFVRHSEQGLSNFVVK
RPREEDCNADADLTIDQMLAKYANENSEDDSDFVPNEEEEEEESSSSSGE
SESESGSSEGISSGEVDEVVSQPKQKSAGAVVENGVHKAEEKENDKGKLN
ITTTSNGNNDKEQADVGNGH*
BS26025.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:11:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jabba-PB | 320 | CG15092-PA | 1..320 | 1..320 | 1633 | 100 | Plus |
| Jabba-PI | 406 | CG42351-PI | 1..318 | 1..318 | 1614 | 99.7 | Plus |
| Jabba-PD | 367 | CG42351-PD | 1..316 | 1..316 | 1607 | 100 | Plus |
| Jabba-PH | 388 | CG42351-PH | 1..316 | 1..316 | 1607 | 100 | Plus |
| Jabba-PG | 438 | CG42351-PG | 1..316 | 1..316 | 1607 | 100 | Plus |
