Clone BS26027 Report

Search the DGRC for BS26027

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:260
Well:27
Vector:pDNR-Dual
Associated Gene/TranscriptIpk2-RA
Protein status:BS26027.pep: gold
Sequenced Size:962

Clone Sequence Records

BS26027.complete Sequence

962 bp assembled on 2011-09-14

GenBank Submission: KX800242

> BS26027.complete
GAAGTTATCAGTCGACATGGCCAAGAGTGATCAGGAGCTTCCCGAGGGAT
TTCGCCAGCTAAAGACACAGGTTGCGGGTCACACATTCGAGGAAAGCAAC
GCGGAGGCAGTGGGTCTTCTGCAGGACTCGAAGGCGGGATGCGTACTGAA
GCCTCTGGGGAAGCCGGAGTGCGGCGAACGGGAGCTGCGCTTCTATGAGT
CACTCGCAGAGGCAGGTGCTTCAGGTGATAATGACCTCCTGGCGCTGCTC
CGCGGTCACGTCCCCCGGTTTTACGGCCCCCTAAAACTGGTTGTGAATCG
GCGCGAGCGCACGTTCCTGCGCCTGGAAGACCTCACGCGATCGTACGCAA
AGCCGTGCGTCATGGACGTGAAGATGGGTAAACGAACCTGGGATCCAGAG
TCCTCGCCCAACAAACGAAAGGTTGAGGAGGCCAAGTACGTTATGTGCAA
GCAAAAGCTGGGCCTTTGCTTGCCGGGATTCCAAGTGTACCTTCCCAAGG
AGGAGCACACTCAGGAGACCACAATCCTGCGCCACGGGAAGGACTACGGG
AAGAGCTTGAATGTGGAGGGATTCAAGCAAACTATGGCCCTGTTTTTCAA
TGCCAGCACAAGTGATTCCAAGAGCAGGAGAGCGGGCTGTGAGTTGCTTT
TGAAGGAAGTACTCCGCCAGCTGCAGGAGATCCTAGCGTGGTTTCAACGG
CAGCGCCTGCTGCATTTCTATGCCAGTTCTTTGCTCATCTGCTACGACTA
TTCAAGACTGGCTGATCCCCCAAAGCCGTTGATAAACGGCTACCACCAAA
ATGATGATGACCCCGCCACTTGGGTGCGGGTCAAAATGATCGACTTTGCT
CATGTTTACCCGGCAGAACAGGGCTTGCCGGACGAGAACTACATGTTCGG
TCTCCAGAGCCTGATAGAAGTCGTCCAATCAATACTCCACCGATGAAAGC
TTTCTAGACCAT

BS26027.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:27:32
Subject Length Description Subject Range Query Range Score Percent Strand
Ipk2-RA 930 CG13688-PA 1..930 17..946 4635 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:27:33
Subject Length Description Subject Range Query Range Score Percent Strand
Ipk2-RA 1232 CG13688-RA 129..1059 16..946 4640 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:27:30
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 573206..574136 946..16 4640 99.9 Minus
Blast to na_te.dros performed on 2014-11-27 07:27:31 has no hits.

BS26027.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-14 12:05:34 Download gff for BS26027.complete
Subject Subject Range Query Range Percent Splice Strand
Ipk2-RA 98..1026 17..945 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:15:37 Download gff for BS26027.complete
Subject Subject Range Query Range Percent Splice Strand
Ipk2-RA 130..1058 17..945 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:11:02 Download gff for BS26027.complete
Subject Subject Range Query Range Percent Splice Strand
Ipk2-RA 130..1058 17..945 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:11:02 Download gff for BS26027.complete
Subject Subject Range Query Range Percent Splice Strand
2L 573207..574135 17..945 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:15:37 Download gff for BS26027.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 573207..574135 17..945 99   Minus

BS26027.pep Sequence

Translation from 16 to 945

> BS26027.pep
MAKSDQELPEGFRQLKTQVAGHTFEESNAEAVGLLQDSKAGCVLKPLGKP
ECGERELRFYESLAEAGASGDNDLLALLRGHVPRFYGPLKLVVNRRERTF
LRLEDLTRSYAKPCVMDVKMGKRTWDPESSPNKRKVEEAKYVMCKQKLGL
CLPGFQVYLPKEEHTQETTILRHGKDYGKSLNVEGFKQTMALFFNASTSD
SKSRRAGCELLLKEVLRQLQEILAWFQRQRLLHFYASSLLICYDYSRLAD
PPKPLINGYHQNDDDPATWVRVKMIDFAHVYPAEQGLPDENYMFGLQSLI
EVVQSILHR*

BS26027.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:17:01
Subject Length Description Subject Range Query Range Score Percent Strand
Ipk2-PA 309 CG13688-PA 1..309 1..309 1626 100 Plus
CG10082-PB 672 CG10082-PB 67..217 94..252 168 30.1 Plus
CG10082-PA 902 CG10082-PA 297..447 94..252 168 30.1 Plus