Clone BS26036 Report

Search the DGRC for BS26036

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:260
Well:36
Vector:pDNR-Dual
Associated Gene/TranscriptCG14507-RC
Protein status:BS26036.pep: gold
Sequenced Size:1154

Clone Sequence Records

BS26036.complete Sequence

1154 bp assembled on 2011-08-02

GenBank Submission: KX803248

> BS26036.complete
GAAGTTATCAGTCGACATGTTGTGGATAATGGGGCTAGTAGTGGCCGCTG
TGCGGCTCAATGGACAGGCGAGCGGTGCGGCAAATGTCACGGTAATCGAA
GACATTAGGAGCGCCTTCAGAGGCGTCACCAACGACACGGAGCTGCTGAA
TCACATAATACCGGAAATGTACGGGGCGAGCATGCGCAGTGCGAATCCCT
CCTTTGTCTTCAAAATGCCTAGCAAATCGAACGGCGGTGGCGACGACTTC
GAGCTGCTAACAATGCAACGATCCGATTTCGCGGAACCAATCTTCCCCAA
TATCAGCCAGTCGGCCACGGCCATCGATTCACCCAGTACCATTCCGCCGG
AAACGAGCGTGAAGACCAGTCTCATGGTATCGCCGCAACAGGATTGGCAG
CAGATGGGTCTGGATGGCTGGACGGGGGAGCTGAAGCCACCAGTAGCCTC
GCTGGAGCAGGATCATAGGGACACTCGACCGCCGATCAGCTGGCAGAACT
CGTATCCCCACGACGAGATTCGTCTGGAGTTCCAGAACCACCACTTCGAT
GGCCGGGTGACGGACATACGCGTGATAACACAAACAACTAGTAAACCAGC
TGAGATGGAGGACCTGATGAATGTTCAGAATGTGTACATAGCGCGGGTAA
ACGATCCCTTCGGTTACTCCATGAAGTGGAGCTTCACCAACGACAGCAGC
CGGGAAAAAGAGCTTTTGCCGGAGGGAGATCGCGGAAAGAGGGACGTTGC
TCGGCTGTACTCCATGATCAAGTGCTCCACGGGCTGTGATCCGCTGATCT
ACAAGGGCTACGGCTGCTACTGCGGATTCGGTGGCCACGGAGTGCCCGCC
GATGGCATCGATCGCTGTTGTCGCGTGCACGACAAGTGCTACGGTCAGAG
CAACTGCATCTCCTATCTGGAATACTTTGTGCCCTACGTGTGGAAGTGCT
ACCGCGGCAAGCCGCTGTGCGCCGTCGATCATGGCGAGTTCGGTGGCCCC
GACTCCTGTGCCGCTCGTCTCTGCCAATGCGACCTGCGGCTTTCCAGGTG
CCTCAAGAGGTACTACTGCCCACACCGACGCTCCATTTGCCACTCGTCCA
GATCTCGACGCTTACAGAACCTAATATTCTTCGATTGAAAGCTTTCTAGA
CCAT

BS26036.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:48:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG14507-RC 1122 CG14507-PC 1..1122 17..1138 5595 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG14507-RC 1233 CG14507-RC 47..1170 15..1138 5605 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29226267..29226938 1138..467 3360 100 Minus
3R 32079331 3R 29227225..29227679 469..15 2260 99.8 Minus
Blast to na_te.dros performed on 2014-11-27 00:48:49 has no hits.

BS26036.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-02 12:42:52 Download gff for BS26036.complete
Subject Subject Range Query Range Percent Splice Strand
CG14507-RC 54..1169 22..1137 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:34:57 Download gff for BS26036.complete
Subject Subject Range Query Range Percent Splice Strand
CG14507-RC 54..1169 22..1137 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:10:25 Download gff for BS26036.complete
Subject Subject Range Query Range Percent Splice Strand
CG14507-RC 54..1169 22..1137 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:10:25 Download gff for BS26036.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29226268..29226936 469..1137 100 <- Minus
3R 29227226..29227672 22..468 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:34:57 Download gff for BS26036.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25051990..25052658 469..1137 100 <- Minus
arm_3R 25052948..25053394 22..468 99   Minus

BS26036.pep Sequence

Translation from 16 to 1137

> BS26036.pep
MLWIMGLVVAAVRLNGQASGAANVTVIEDIRSAFRGVTNDTELLNHIIPE
MYGASMRSANPSFVFKMPSKSNGGGDDFELLTMQRSDFAEPIFPNISQSA
TAIDSPSTIPPETSVKTSLMVSPQQDWQQMGLDGWTGELKPPVASLEQDH
RDTRPPISWQNSYPHDEIRLEFQNHHFDGRVTDIRVITQTTSKPAEMEDL
MNVQNVYIARVNDPFGYSMKWSFTNDSSREKELLPEGDRGKRDVARLYSM
IKCSTGCDPLIYKGYGCYCGFGGHGVPADGIDRCCRVHDKCYGQSNCISY
LEYFVPYVWKCYRGKPLCAVDHGEFGGPDSCAARLCQCDLRLSRCLKRYY
CPHRRSICHSSRSRRLQNLIFFD*

BS26036.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:11:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG14507-PC 373 CG14507-PC 1..373 1..373 2037 100 Plus