BS26053.complete Sequence
1505 bp assembled on 2012-04-25
GenBank Submission: KX801160
> BS26053.complete
GAAGTTATCAGTCGACATGGCTGCACCAGCAGCCTGTACGCGTTTTTCGG
ACAATTACGACATCAAAGAAGAGTTGGGAAAAGGAGCATTCTCAATTGTG
AAAAGATGTGTCCAAAAGTCAACTGGCTTTGAATTTGCTGCAAAAATTAT
CAATACAAAAAAATTAACTGCCAGAGACTTTCAAAAACTGGAACGTGAAG
CAAGGATCTGCAGAAAGTTACACCATCCCAACATAGTGCGGCTACATGAC
AGTATACAGGAGGAGAACTATCACTACCTTGTTTTTGACCTTGTAACCGG
TGGTGAACTTTTTGAAGATATCGTTGCACGCGAATTTTATTCAGAAGCTG
ATGCATCACATTGTATTCAACAAATATTGGAATCGGTCAATCACTGCCAC
CAAAATGGTGTGGTGCACCGAGATCTGAAACCAGAGAATTTACTATTAGC
TAGTAAGGCTAAGGGTGCAGCAGTGAAACTCGCTGACTTTGGTCTAGCCA
TTGAAGTTCAAGGCGATCATCAGGCTTGGTTTGGATTTGCCGGCACACCA
GGATATCTGTCTCCTGAGGTATTGAAAAAGGAGCCCTATGGGAAATCGGT
AGACATATGGGCATGTGGAGTTATTCTTTACATACTTCTTGTCGGTTATC
CACCCTTTTGGGATGAAGATCAGCACCGACTGTACTCGCAGATAAAAGCG
GGAGCTTATGATTATCCGTCTCCAGAATGGGATACGGTTACTCCAGAAGC
TAAAAATCTTATTAATCAAATGCTAACCGTTAATCCAAATAAACGAATAA
CTGCAGCTGAGGCTTTAAAACATCCGTGGATTTGTCAACGCGAACGTGTG
GCTTCCGTTGTGCATCGCCAAGAAACCGTAGACTGTCTCAAGAAATTTAA
TGCGCGGCGCAAGCTAAAGGGAGCCATACTTACGACAATGTTGGCGACCA
GAAATTTTTCGAGCAGAAGTATGATAACTAAAAAAGGTGAAGGATCACAG
GTCAAAGAATCAACCGATTCATCTAGCACTACTCTTGAAGACGATGACAT
AAAAGCAGCTAGACGACAAGAAATAATAAAGATAACTGAGCAGTTGATTG
AAGCAATTAACAGTGGCGACTTTGATGGATACACCAAAATATGTGATCCG
CATCTAACTGCCTTTGAGCCGGAAGCACTGGGTAACCTTGTAGAAGGAAT
TGATTTTCATAAATTTTATTTTGAAAATGTTCTTGGTAAAAACTGCAAAG
CTATAAACACAACCATTTTAAATCCTCATGTGCACTTACTTGGTGAAGAA
GCCGCTTGCATTGCCTATGTGAGACTTACGCAGTACATTGATAAGCAAGG
ACATGCACATACCCATCAGTCCGAGGAGACGCGAGTCTGGCACAAACGCG
ATAACAAATGGCAGAATGTTCATTTTCATCGAAGTGCATCTGCCAAAATA
AGCGGAGCAACTACATTCGATTTTATACCCCAAAAATAGAAGCTTTCTAG
ACCAT
BS26053.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:22:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CaMKII-RH | 1473 | CG18069-PH | 1..1473 | 17..1489 | 7365 | 100 | Plus |
| CaMKII-RC | 1473 | CG18069-PC | 1..1473 | 17..1489 | 7365 | 100 | Plus |
| CaMKII-RA | 1473 | CG18069-PA | 1..1473 | 17..1489 | 7365 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:22:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CaMKII-RH | 2371 | CG18069-RH | 776..2248 | 17..1489 | 7365 | 100 | Plus |
| CaMKII-RC | 3759 | CG18069-RC | 297..1769 | 17..1489 | 7365 | 100 | Plus |
| CaMKII-RA | 3589 | CG18069-RA | 127..1599 | 17..1489 | 7365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:22:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 1047822..1048148 | 618..292 | 1635 | 100 | Minus |
| 4 | 1348131 | 4 | 1037278..1037422 | 1489..1345 | 725 | 100 | Minus |
| 4 | 1348131 | 4 | 1047263..1047390 | 963..836 | 640 | 100 | Minus |
| 4 | 1348131 | 4 | 1047453..1047575 | 835..713 | 615 | 100 | Minus |
| 4 | 1348131 | 4 | 1037471..1037591 | 1349..1229 | 590 | 99.2 | Minus |
| 4 | 1348131 | 4 | 1047635..1047730 | 712..617 | 480 | 100 | Minus |
| 4 | 1348131 | 4 | 1037646..1037740 | 1229..1135 | 475 | 100 | Minus |
| 4 | 1348131 | 4 | 1050298..1050392 | 176..82 | 475 | 100 | Minus |
| 4 | 1348131 | 4 | 1045156..1045248 | 1055..963 | 465 | 100 | Minus |
| 4 | 1348131 | 4 | 1038359..1038441 | 1134..1052 | 415 | 100 | Minus |
| 4 | 1348131 | 4 | 1050455..1050519 | 81..17 | 325 | 100 | Minus |
| 4 | 1348131 | 4 | 1049187..1049248 | 236..175 | 310 | 100 | Minus |
| 4 | 1348131 | 4 | 1048504..1048560 | 291..235 | 285 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:22:30 has no hits.
BS26053.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 15:17:57 Download gff for
BS26053.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CaMKII-RE | 297..1338 | 17..1058 | 99 | -> | Plus |
| CaMKII-RE | 1396..1818 | 1059..1481 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:10 Download gff for
BS26053.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CaMKII-RA | 127..1591 | 17..1481 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:02:50 Download gff for
BS26053.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CaMKII-RA | 127..1591 | 17..1481 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:02:50 Download gff for
BS26053.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 1048504..1048558 | 237..291 | 100 | <- | Minus |
| 4 | 1049187..1049246 | 177..236 | 100 | <- | Minus |
| 4 | 1050298..1050392 | 82..176 | 100 | <- | Minus |
| 4 | 1050455..1050519 | 17..81 | 100 | | Minus |
| 4 | 1047823..1048148 | 292..617 | 100 | <- | Minus |
| 4 | 1037286..1037422 | 1345..1481 | 100 | <- | Minus |
| 4 | 1037476..1037590 | 1230..1344 | 100 | <- | Minus |
| 4 | 1037646..1037740 | 1135..1229 | 100 | <- | Minus |
| 4 | 1038359..1038437 | 1056..1134 | 100 | <- | Minus |
| 4 | 1045156..1045248 | 963..1055 | 100 | <- | Minus |
| 4 | 1047264..1047390 | 836..962 | 100 | <- | Minus |
| 4 | 1047453..1047575 | 713..835 | 100 | <- | Minus |
| 4 | 1047635..1047729 | 618..712 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:10 Download gff for
BS26053.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 1065782..1065874 | 963..1055 | 100 | <- | Minus |
| arm_4 | 1067890..1068016 | 836..962 | 100 | <- | Minus |
| arm_4 | 1068079..1068201 | 713..835 | 100 | <- | Minus |
| arm_4 | 1068261..1068355 | 618..712 | 100 | <- | Minus |
| arm_4 | 1068449..1068774 | 292..617 | 100 | <- | Minus |
| arm_4 | 1069130..1069184 | 237..291 | 100 | <- | Minus |
| arm_4 | 1069813..1069872 | 177..236 | 100 | <- | Minus |
| arm_4 | 1070924..1071018 | 82..176 | 100 | <- | Minus |
| arm_4 | 1071081..1071145 | 17..81 | 100 | | Minus |
| arm_4 | 1057912..1058048 | 1345..1481 | 100 | <- | Minus |
| arm_4 | 1058102..1058216 | 1230..1344 | 100 | <- | Minus |
| arm_4 | 1058272..1058366 | 1135..1229 | 100 | <- | Minus |
| arm_4 | 1058985..1059063 | 1056..1134 | 100 | <- | Minus |
BS26053.pep Sequence
Translation from 16 to 1488
> BS26053.pep
MAAPAACTRFSDNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKL
TARDFQKLEREARICRKLHHPNIVRLHDSIQEENYHYLVFDLVTGGELFE
DIVAREFYSEADASHCIQQILESVNHCHQNGVVHRDLKPENLLLASKAKG
AAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVDIWAC
GVILYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLIN
QMLTVNPNKRITAAEALKHPWICQRERVASVVHRQETVDCLKKFNARRKL
KGAILTTMLATRNFSSRSMITKKGEGSQVKESTDSSSTTLEDDDIKAARR
QEIIKITEQLIEAINSGDFDGYTKICDPHLTAFEPEALGNLVEGIDFHKF
YFENVLGKNCKAINTTILNPHVHLLGEEAACIAYVRLTQYIDKQGHAHTH
QSEETRVWHKRDNKWQNVHFHRSASAKISGATTFDFIPQK*
BS26053.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:23:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CaMKII-PH | 490 | CG18069-PH | 1..490 | 1..490 | 2593 | 100 | Plus |
| CaMKII-PC | 490 | CG18069-PC | 1..490 | 1..490 | 2593 | 100 | Plus |
| CaMKII-PA | 490 | CG18069-PA | 1..490 | 1..490 | 2593 | 100 | Plus |
| CaMKII-PB | 509 | CG18069-PB | 1..509 | 1..490 | 2563 | 96.3 | Plus |
| CaMKII-PE | 509 | CG18069-PE | 1..509 | 1..490 | 2563 | 96.3 | Plus |
