BS26094.complete Sequence
2366 bp assembled on 2011-11-21
GenBank Submission: KX801473
> BS26094.complete
GAAGTTATCAGTCGACATGATTTTGTGTTTACATTTTGCCGGCAAATCGA
AAATTGGATTTAGAGGCCCTAAATTAACCATGAATCTGTTCGAGGAGCTG
GACACCTTGGACCCCTCCTTCAAACTAGAGCCTCCCCGCATCGAGACGCC
CACGGCGCACAAGATTACCGTGTTGATATTGCTCAAACAGTATGTGATTA
ACAAAAAAAACTGTTTGGATACTGGGATATCCATGCGCACCCAGCGACGG
CGCATGTTCTATATGCTGGTATTCAAGCTCATCCAGGAGCAGGACAAGAG
TTACAATGAGCTACATAGTTTGTTGACCACGGGGAAATACAAACTGGATA
CTCTGATGCTGGAATCCTTCGAAAAAGCCATGTCCGAGTTTTGTGCGGGC
AGCATTGAGGCCTTGTTTGACTTCTCGGAGATCCAGAACATCGACGAGAT
CCTAAACGAAAACTACGGCATTAGCCAGTTCAGCATGGTGGGCGTTTATG
TGCGCAGAGTGGGCGTGGTGCTAGAGCGCCTCAGTTTCCCTGAGATGATG
GATATGTACAAGAACGTATGCTCCTACTACGAGAGAGGAGTTCGAGCTGC
TGCCTCTGGTTCAAGAATGGCCGTAGCCGGAGGTATTCTGCACAGGGAGG
AGACTCCTCCTCCGAATCCCATAACAGAAAAGCCTGAGGATCCTAAACCT
AAGAAGAAAGTAGAGGCCGTAGCTCGTATTGCCCAAGAACGTAATCCCCT
GAGCAAATGGGCGCCAAAACAGGCCAAGTTTTTCATCAACAAACAGTCGG
AGCTGTTGGAGAATAACGAACGTAAGGCTTTGCCTCCTTTGGAACTCCAG
AAGAAGGTGCAGGAGATCATACACGACCTCCCACTAACAACTACACCCTA
TTTCCTGGGCTACATGAATCAGTTGAGAGTTAGGGATTACTACAATGCTC
TTTCTGCCCTCCACAGAGCATTGGACAGAAGTCCCGTGCGCCTGATGAGC
CAGGAGAAGGGCTACCAGTATTTTTGCGTCAATTTGGCGGTACTACATGC
CACCTTTGGTCATCGGGATGAAGCGCTAGCAGCGCTCAGGGAAAGCATTA
TGCTGGCCCAGGAGCACGGCGACAAAAGGAGCCTTAACCTTGCCAACACT
TGGTACTGCTTGCTCAGGGATGAGCTTCCCTTGTCTGCTGTTCAAAAGAG
TGTGCAGGATGCCAACGAAGTGGATGGTTCTCTGCTGCAGAACTACACCT
TAGCCCTACACTTCGCTGTAAAACTAGGAACGGTGGCTGGCTACCAACCA
CTAAGACTCTTTGATCTCCTGCAGCACAGCGACAATCTCACTAATCGCAA
CAACTTCGCCGACCACGCATCAGAGGCCCTTGCCTTGAGGAGTGCTGTTT
GGTCTGCTTATGGAAGGCATGAGCTAGCTGCTTTGTACTCCCAAGTCCTA
TTGACAGGCAGAGACAGGTTCGGCAGTGGATCTGCGGGTTTGGGAAGCGC
TTTGGCCAGTTTCGCCCTGTGGCTTCAGTTGCAAGGAGAGCCACAACTAT
CCAAGGTACTCCTACATCATGCTAAACAGCGCTTTCCGCGTTTGCCCAGC
GCCGAGGGTTGGATGATAAGCCAGTGTCATGTGGTCATTCAGGCGGGAAT
CTACCAGTGTCGCTGGCACGATGCTCTGAAGGCTTGCGATCAGCTATATT
TGATCGATCCCTCTGACTCCTTATTCCAACGTGCCTCCATATATGTGGCC
AAGCGCGAGTTTTTCAATGCCAGGCGCCTCCTGGACAAGTTGGCCGTGCA
GGATAACATACCATTCCTCCTTAGGATGAGGGTTCAAGTGTTGCTTGGCT
ATTGTGGCATGGCGAACGGTCGATTTTCAAGTGAAACAACAATGCTTCTG
CTCCGTGTGTCCGAGGAAATGTCCGAGGCCCAGATGGATTATGAGTTAGC
TCTGGTGGATCTGCTCTTGGCCCTGCAACTATTGCTACTCGGTATGCCGC
AGAAGGCCTATCAGGCAATAAAGCGCTGCATGCACGACATTCACATCAAC
GGCGGTCTATATGAACGAGCAAAAACGGATTTCGTGTTCGTTCGCTGCCT
GTTGGCCGTCAATCAGAATGATGCGGAGAAACGGAAAGCGCAGCTGCTTA
AATCGCAAGTAATCCTCCAGCGTGCAGCTCAATCATTCAAGAAACTCTCC
GCACATGCGAAGGTTTTGGATGTGTACGTGTTCTTGGCACAGCGATTTAA
CGAATTTGGCGATCGGAATTTAAGGAATAAGTACGCTGGAGAGTTCCGAC
GCTACTTTACGGATCACCCCATTCCAAGGGAATATCTGGGTAGTCCTTAG
AAGCTTTCTAGACCAT
BS26094.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:53:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ida-RA | 2334 | CG10850-PA | 1..2334 | 17..2350 | 11400 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:53:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ida-RA | 2408 | CG10850-RA | 14..2347 | 17..2350 | 11400 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:53:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3905602..3907752 | 200..2350 | 10485 | 99.2 | Plus |
| 3L | 28110227 | 3L | 3905357..3905539 | 17..199 | 915 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 07:53:45 has no hits.
BS26094.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-21 13:53:32 Download gff for
BS26094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ida-RA | 28..2347 | 31..2350 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:47 Download gff for
BS26094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ida-RA | 28..2347 | 31..2350 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:06:18 Download gff for
BS26094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ida-RA | 28..2347 | 31..2350 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:06:18 Download gff for
BS26094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3905371..3905539 | 31..199 | 100 | -> | Plus |
| 3L | 3905602..3907752 | 200..2350 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:47 Download gff for
BS26094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3905371..3905539 | 31..199 | 100 | -> | Plus |
| arm_3L | 3905602..3907752 | 200..2350 | 99 | | Plus |
BS26094.pep Sequence
Translation from 16 to 2349
> BS26094.pep
MILCLHFAGKSKIGFRGPKLTMNLFEELDTLDPSFKLEPPRIETPTAHKI
TVLILLKQYVINKKNCLDTGISMRTQRRRMFYMLVFKLIQEQDKSYNELH
SLLTTGKYKLDTLMLESFEKAMSEFCAGSIEALFDFSEIQNIDEILNENY
GISQFSMVGVYVRRVGVVLERLSFPEMMDMYKNVCSYYERGVRAAASGSR
MAVAGGILHREETPPPNPITEKPEDPKPKKKVEAVARIAQERNPLSKWAP
KQAKFFINKQSELLENNERKALPPLELQKKVQEIIHDLPLTTTPYFLGYM
NQLRVRDYYNALSALHRALDRSPVRLMSQEKGYQYFCVNLAVLHATFGHR
DEALAALRESIMLAQEHGDKRSLNLANTWYCLLRDELPLSAVQKSVQDAN
EVDGSLLQNYTLALHFAVKLGTVAGYQPLRLFDLLQHSDNLTNRNNFADH
ASEALALRSAVWSAYGRHELAALYSQVLLTGRDRFGSGSAGLGSALASFA
LWLQLQGEPQLSKVLLHHAKQRFPRLPSAEGWMISQCHVVIQAGIYQCRW
HDALKACDQLYLIDPSDSLFQRASIYVAKREFFNARRLLDKLAVQDNIPF
LLRMRVQVLLGYCGMANGRFSSETTMLLLRVSEEMSEAQMDYELALVDLL
LALQLLLLGMPQKAYQAIKRCMHDIHINGGLYERAKTDFVFVRCLLAVNQ
NDAEKRKAQLLKSQVILQRAAQSFKKLSAHAKVLDVYVFLAQRFNEFGDR
NLRNKYAGEFRRYFTDHPIPREYLGSP*
BS26094.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:38:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ida-PA | 777 | CG10850-PA | 1..777 | 1..777 | 4000 | 100 | Plus |
