BS26109.complete Sequence
551 bp assembled on 2011-08-24
GenBank Submission: KX805760
> BS26109.complete
GAAGTTATCAGTCGACATGCGTCACGCTGTGATCCTTGTTTTCGTGTGTT
GCCTGCTGATCGCCTTAACCTCAGCCGGTTTGCTGGGCGGTGGAGGCGGT
GGTGGTGGCTACGGCGGTGGTGGTGGTGGTGGCTACGGCGGTGGTGGTGG
TGGTCAGAGCGGCTACGGCGGCGGTGGCCAAAAGAACGGAGGAGGCGGCC
ATGGAGGTGGCGGCCAGGGAAGCTACGGAGGCGGTAGCCAAGGTGGACAT
GGAGGCGGTGGCCAAGGAGGTTGGCAGAAGAACGGAGGAGGTGGTGGACA
AGGAGGCTATGGAGGTGGCAATCAAGGTGGCCACGGAGGACAAGGAGGTT
ATGGCGGCGGCGGTCATGGAGGCGGTGGCCATGCAAGCAAGTCCTTGGCC
GGCAATCGCGGTAGTTCCGTGTCCTGGCAGGGCGGAAATGGAGGCAACAA
GAACGGAGGCGGCGGAGGAGGTGGTGGTGGCCTGTACGGTGGTGGTGGCG
GTGGAGGTGGCAAACAACATGGCGGTGGCTGGTAAAAGCTTTCTAGACCA
T
BS26109.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:38:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5172-RD | 519 | CG5172-PD | 1..519 | 17..535 | 2595 | 100 | Plus |
| CG5172-RC | 321 | CG5172-PC | 1..277 | 17..293 | 1385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:38:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5172-RD | 788 | CG5172-RD | 106..624 | 17..535 | 2595 | 100 | Plus |
| CG5172-RC | 531 | CG5172-RC | 106..382 | 17..293 | 1385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:38:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17221547..17221773 | 17..243 | 1135 | 100 | Plus |
| X | 23542271 | X | 17222277..17222487 | 325..535 | 1055 | 100 | Plus |
| X | 23542271 | X | 17222124..17222211 | 241..328 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:38:33 has no hits.
BS26109.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:39:37 Download gff for
BS26109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5172-RD | 106..622 | 17..533 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:05:58 Download gff for
BS26109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5172-RD | 106..622 | 17..533 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:23:52 Download gff for
BS26109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5172-RD | 106..622 | 17..533 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:23:52 Download gff for
BS26109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17221547..17221772 | 17..242 | 100 | -> | Plus |
| X | 17222126..17222209 | 243..326 | 100 | -> | Plus |
| X | 17222279..17222485 | 327..533 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:05:58 Download gff for
BS26109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17115580..17115805 | 17..242 | 100 | -> | Plus |
| arm_X | 17116159..17116242 | 243..326 | 100 | -> | Plus |
| arm_X | 17116312..17116518 | 327..533 | 100 | | Plus |
BS26109.pep Sequence
Translation from 16 to 534
> BS26109.pep
MRHAVILVFVCCLLIALTSAGLLGGGGGGGGYGGGGGGGYGGGGGGQSGY
GGGGQKNGGGGHGGGGQGSYGGGSQGGHGGGGQGGWQKNGGGGGQGGYGG
GNQGGHGGQGGYGGGGHGGGGHASKSLAGNRGSSVSWQGGNGGNKNGGGG
GGGGGLYGGGGGGGGKQHGGGW*
BS26109.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:24:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5172-PD | 172 | CG5172-PD | 1..172 | 1..172 | 998 | 100 | Plus |
| CG5172-PC | 106 | CG5172-PC | 1..92 | 1..92 | 526 | 100 | Plus |
| CG14191-PA | 193 | CG14191-PA | 3..188 | 8..172 | 395 | 46.9 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 248..406 | 25..172 | 386 | 51.6 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 248..406 | 25..172 | 386 | 51.6 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 306..473 | 21..171 | 382 | 54.2 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 272..451 | 19..172 | 380 | 48.9 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 248..420 | 24..171 | 378 | 51.4 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 340..505 | 21..171 | 373 | 50.9 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 233..390 | 22..171 | 372 | 51.8 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 374..527 | 21..171 | 358 | 50 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 405..591 | 21..169 | 303 | 43.9 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 235..341 | 37..172 | 268 | 48.9 | Plus |
| CG14191-PA | 193 | CG14191-PA | 79..190 | 13..103 | 221 | 46 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 29..119 | 20..125 | 211 | 48.2 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 31..277 | 16..171 | 211 | 31.6 | Plus |
| CG5172-PC | 106 | CG5172-PC | 24..81 | 107..171 | 146 | 56.7 | Plus |
